Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding

Term: GO:0043565  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene22604 SustainPine v3.0 1261
• AutoFact: translin-like protein [Arabidopsis thaliana] dbj|BAC41849.1| unknown protein [Arabidopsis thaliana] gb|ABD19690.1| At2g03780 [Arabidopsis thaliana] gb|AEC05748.1| translin-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene22626 SustainPine v3.0 1124
• AutoFact: Heat shock transcription factor (HSF) [Glycine max] 1.99993e-41
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Sma3: Heat shock factor protein HSF30 8.429e-15
Complete
sp_v3.0_unigene22653 SustainPine v3.0 953
• AutoFact: [B] COG5602 Histone deacetylase complex, SIN3 component 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative histone deacetylase complex, SIN3 component 5.176e-16
Putative Complete
sp_v3.0_unigene22668 SustainPine v3.0 965
• AutoFact: Unassigned protein 3.00018e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene22925 SustainPine v3.0 756
• AutoFact: putative WRKY transcription factor 12 [Arabidopsis thaliana] sp|Q93WY4.1|WRK12_ARATH RecName: Full=Probable WRKY transcription factor 12; AltName: Full=WRKY DNA-binding protein 12 gb|AAK96195.1|AF404857_1 WRKY transcription factor 12 [Arabidopsis thaliana 3.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene22977 SustainPine v3.0 454
• AutoFact: Unassigned protein 3.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene23372 SustainPine v3.0 1245
• AutoFact: overexpressor of cationic peroxidase 3 [Arabidopsis thaliana] gb|AAN72028.1| putative protein [Arabidopsis thaliana] gb|AAP42756.1| At5g11270 [Arabidopsis thaliana] gb|AED91654.1| overexpressor of cationic peroxidase 3 [Arabidopsis thaliana] 8.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene23657 SustainPine v3.0 682
• AutoFact: Multiprotein-bridging factor 1 n=2 Tax=Metarhizium RepID=E9E395_METAQ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene23659 SustainPine v3.0 699
• AutoFact: Homeobox-leucine zipper-like protein n=2 Tax=Picea RepID=Q3HRT1_PICGL 5.0e-28
• FL-Next: tr=Homeobox-leucine zipper-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: DNA-binding protein 4.015e-09
Internal
sp_v3.0_unigene23674 SustainPine v3.0 1105
• AutoFact: DNA binding protein [Arabidopsis thaliana] gb|AAG51077.1|AC069472_17 unknown protein; 19524-20560 [Arabidopsis thaliana] gb|AAM64678.1| unknown [Arabidopsis thaliana] gb|AEE75167.1| DNA binding protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene23781 SustainPine v3.0 671
• AutoFact: TPA_inf: WRKY transcription factor 7 [Oryza sativa (japonica cultivar-group)] gb|AAT39221.1| 'unknown protein, contains WRKY DNA -binding domain' [Oryza sativa Japonica Group] gb|ABC02807.1| WRKY transcription factor 7 [Oryza sativa] gb|EEE64508.1| hypoth 6.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WRKY transcription factor, putative 8.206e-08
Putative Complete
sp_v3.0_unigene24011 SustainPine v3.0 1001
• AutoFact: armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] dbj|BAF01151.1| hypothetical protein [Arabidopsis thaliana] gb|AEE28274.1| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin-protein ligase, putative 3.923e-09
Complete
sp_v3.0_unigene24073 SustainPine v3.0 773
• AutoFact: Mads box protein, putative n=1 Tax=Ricinus communis RepID=B9SMY1_RICCO 1.0e-23
• FL-Next: tr=MADS box transcription factor; Pinus resinosa (Red pine) (Norway pine). 0.0
• Sma3: AGAMOUS-like protein 3.474e-21
N-terminus
sp_v3.0_unigene24196 SustainPine v3.0 1258
• AutoFact: Putative MADS domain transcription factor GGM10 n=1 Tax=Gnetum gnemon RepID=Q9XGJ7_GNEGN 0.0
• FL-Next: tr=MADS box protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: AGAMOUS-like protein 9.12e-31
Complete
sp_v3.0_unigene24249 SustainPine v3.0 685
• AutoFact: Cell division protein ftsy, putative n=1 Tax=Ricinus communis RepID=B9RDL9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene24444 SustainPine v3.0 816
• AutoFact: B-block binding subunit of TFIIIC [Arabidopsis thaliana] gb|AAK62783.1|AC027036_4 hypothetical protein [Arabidopsis thaliana] gb|AEE33578.1| B-block binding subunit of TFIIIC [Arabidopsis thaliana] 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
N-terminus
sp_v3.0_unigene24510 SustainPine v3.0 4728
• AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative 3.169e-13
Complete
sp_v3.0_unigene24521 SustainPine v3.0 524
• AutoFact: PREDICTED: similar to DNA repair protein RAD51 homolog A n=1 Tax=Hydra magnipapillata RepID=UPI0001923F2B 0.0
• FL-Next: tr=RAD51-like protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: Meiotic recombination protein DMC1 homolog 6.709e-12
Internal
sp_v3.0_unigene24733 SustainPine v3.0 899
• AutoFact: MADS-box protein JOINTLESS (Fragment) n=1 Tax=Picea abies RepID=B2KZI9_PICAB 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MPF2-like 4.219e-15
C-terminus
sp_v3.0_unigene24825 SustainPine v3.0 487
• AutoFact: MADS-box transcription factor GbMADS1 n=1 Tax=Ginkgo biloba RepID=Q58A82_GINBI 1.0e-37
• FL-Next: tr=MADS-box protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: MADS-box protein 5.248e-21
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain