Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding

Term: GO:0043565  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene20043 SustainPine v3.0 1430
• AutoFact: Putative ABC transporter n=2 Tax=Malvoideae RepID=B2ZAR0_GOSRA 0.0
• FL-Next: sp=ABC transporter I family member 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Cytochrome c biogenesis ATP-binding export protein ccmA-like 3.564e-09
Complete
sp_v3.0_unigene20130 SustainPine v3.0 1020
• AutoFact: WRKY transcription factor 1 (Fragment) n=1 Tax=Picea abies RepID=B2KZJ7_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WRKY transcription factor 5.462e-09
Putative C-terminus
sp_v3.0_unigene20156 SustainPine v3.0 310
• AutoFact: Unassigned protein 4.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene20205 SustainPine v3.0 1265
• AutoFact: Homeobox-leucine zipper-like protein n=2 Tax=Picea RepID=Q3HRT1_PICGL 9.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Homeobox protein, putative 1.103e-16
Complete
sp_v3.0_unigene20374 SustainPine v3.0 1078
• AutoFact: Leafy cotyledon 1 n=2 Tax=Pinaceae RepID=E3P6R9_PSEMZ 0.0
• FL-Next: tr=CCAAT-box binding factor HAP3-like protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: Ccaat-binding transcription factor subunit A, putative 5.492e-36
Complete
sp_v3.0_unigene20420 SustainPine v3.0 1935
• AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_001031566.1| RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAK32943.1|AF367357_1 AT4g00830/A_TM018A10_14 [Arabidopsis thaliana] gb|AAM47474.1| AT4g00830/A_TM018A10 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Nucleolar phosphoprotein, putative 6.638e-13
Complete
sp_v3.0_unigene20824 SustainPine v3.0 941
• AutoFact: multiprotein-bridging factor 1c [Arabidopsis thaliana] sp|Q9LV58.1|MBF1C_ARATH RecName: Full=Multiprotein-bridging factor 1c dbj|BAB01997.1| ethylene-responsive transcriptional coactivator-like protein [Arabidopsis thaliana] gb|AAO44027.1| At3g24500 [Arab 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene21072 SustainPine v3.0 877
• AutoFact: MADS-box transcription factor n=3 Tax=Picea abies RepID=Q9SED8_PICAB 0.0
• FL-Next: tr=MADS-box transcription factor; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: PISTILLATA-like protein 7.618e-26
Complete
sp_v3.0_unigene21797 SustainPine v3.0 481
• AutoFact: WRKY transcription factor 1 (Fragment) n=1 Tax=Picea abies RepID=B2KZJ7_PICAB 1.0e-20
• FL-Next: sp=Probable WRKY transcription factor 42; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene21950 SustainPine v3.0 883
• AutoFact: putative receptor-like protein kinase [Arabidopsis thaliana] sp|O04086.1|Y1105_ARATH RecName: Full=Probable receptor-like protein kinase At1g11050; Flags: Precursor gb|AAB65477.1| Ser/Thr protein kinase isolog; 46094-44217 [Arabidopsis thaliana] gb|AEE286 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr10 scaffold_81, whole genome shotgun sequence 9.239e-17
C-terminus
sp_v3.0_unigene22056 SustainPine v3.0 1349
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RV84_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 2.664e-11
Putative C-terminus
sp_v3.0_unigene22071 SustainPine v3.0 710
• AutoFact: Heat stress transcription factor B-4d n=3 Tax=Oryza sativa RepID=HFB4D_ORYSJ 8.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock transcription factor 1 1.731e-09
Internal
sp_v3.0_unigene22080 SustainPine v3.0 293
• AutoFact: barley mlo defense gene homolog6 [Zea mays] gb|AAK38342.1| seven transmembrane protein Mlo6 [Zea mays] gb|ACN27049.1| unknown [Zea mays] 4.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein MLO, putative 1.776e-20
Internal
sp_v3.0_unigene22094 SustainPine v3.0 519
• AutoFact: pfam00046, Homeobox, Homeobox domain 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Homeobox protein, putative 6.97e-17
C-terminus
sp_v3.0_unigene22249 SustainPine v3.0 636
• AutoFact: Putative receptor protein kinase n=1 Tax=Oryza sativa Japonica Group RepID=Q8S3P8_ORYSJ 2.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr1 scaffold_135, whole genome shotgun sequence 1.114e-06
Putative Complete
sp_v3.0_unigene22381 SustainPine v3.0 1831
• AutoFact: WRKY transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RXH5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WRKY transcription factor, putative 4.206e-13
N-terminus
sp_v3.0_unigene22426 SustainPine v3.0 1813
• AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9SRK5_PHYPA 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Homeobox protein, putative 2.837e-16
Complete
sp_v3.0_unigene22458 SustainPine v3.0 725
• AutoFact: PREDICTED: similar to endothelial differentiation-related factor 1 isoform alpha n=1 Tax=Canis lupus familiaris RepID=UPI00005A1E4A 9.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multiprotein bridging factor type 1 7.31e-06
Complete
sp_v3.0_unigene22541 SustainPine v3.0 1903
• AutoFact: [R] COG0693 Putative intracellular protease/amidase 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protease C56, putative 8.387e-09
Complete
sp_v3.0_unigene22580 SustainPine v3.0 3531
• AutoFact: homeodomain-leucine zipper protein 57 [Glycine max] 5.0e-34
• FL-Next: Isoform 2 of Homeobox-leucine zipper protein HAT7 OS=Arabidopsis thaliana GN=HAT7 0.0
• Sma3: Homeobox protein, putative 3.486e-21
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain