Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding

Term: GO:0043565  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene16695 SustainPine v3.0 362
AutoFact: SCARECROW n=1 Tax=Pinus sylvestris RepID=Q0MRQ2_PINSY 5.0e-38
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Sma3: Protein SCARECROW 5.351e-17
C-terminus
sp_v3.0_unigene16748 SustainPine v3.0 958
AutoFact: homeobox-leucine zipper protein [Glycine max] 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Homeobox protein, putative 2.342e-10
N-terminus
sp_v3.0_unigene16862 SustainPine v3.0 2268
AutoFact: pfam07777, MFMR, G-box binding protein MFMR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transcription factor HBP-1a 4.014e-15
Complete
sp_v3.0_unigene16979 SustainPine v3.0 1672
AutoFact: Homeobox-leucine zipper-like protein n=2 Tax=Picea RepID=Q3HRT1_PICGL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene17147 SustainPine v3.0 1757
AutoFact: Flap endonuclease 1 n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=FEN1_OSTLU 0.0
FL-Next: sp=Flap endonuclease 1; Glycine max (Soybean) (Glycine hispida). 0.0
Complete
sp_v3.0_unigene17455 SustainPine v3.0 1031
AutoFact: multiprotein-bridging factor 1c [Arabidopsis thaliana] sp|Q9LV58.1|MBF1C_ARATH RecName: Full=Multiprotein-bridging factor 1c dbj|BAB01997.1| ethylene-responsive transcriptional coactivator-like protein [Arabidopsis thaliana] gb|AAO44027.1| At3g24500 [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene17469 SustainPine v3.0 1773
AutoFact: WRKY transcription factor NtEIG-D48 [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WRKY transcription factor, putative 9.468e-09
Complete
sp_v3.0_unigene17626 SustainPine v3.0 3945
AutoFact: Bel1 homeotic protein, putative n=1 Tax=Ricinus communis RepID=B9SDI4_RICCO 0.0
FL-Next: tr=Homeobox transcription factor KN4; Picea mariana (Black spruce) (Abies mariana). 0.0
Sma3: Associated with HOX family protein, expressed 9.65e-15
Complete
sp_v3.0_unigene17872 SustainPine v3.0 1270
AutoFact: ethylene-responsive transcription factor ERF003 [Arabidopsis thaliana] sp|Q94AW5.1|ERF03_ARATH RecName: Full=Ethylene-responsive transcription factor ERF003 gb|AAK74017.1| AT5g25190/F21J6_103 [Arabidopsis thaliana] gb|AAL31157.1| AT5g25190/F21J6_103 [Arab 9.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 1.124e-27
Complete
sp_v3.0_unigene17933 SustainPine v3.0 1187
AutoFact: Putative MADS-domain transcription factor GGM19 (Fragment) n=1 Tax=Gnetum gnemon RepID=Q9FST4_GNEGN 7.00005e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene17959 SustainPine v3.0 1006
AutoFact: Putative MADS box transcription factor PrMADS6 n=2 Tax=Pinus radiata RepID=O24490_PINRA 0.0
FL-Next: tr=Putative MADS box transcription factor PrMADS6; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: MADS-box transcription factor 1.86e-21
Complete
sp_v3.0_unigene18219 SustainPine v3.0 1723
AutoFact: MADS-box protein n=7 Tax=Pinaceae RepID=A0S6W4_9CONI 0.0
FL-Next: tr=MADS box transcription factor; Pinus resinosa (Red pine) (Norway pine). 0.0
Sma3: MADS box transcription factor 0.0
Complete
sp_v3.0_unigene18422 SustainPine v3.0 1772
AutoFact: Homeobox transcription factor KN3 n=296 Tax=Pinaceae RepID=Q5SC63_PINTA 0.0
FL-Next: tr=Homeobox transcription factor KN3; Pinus taeda (Loblolly pine). 0.0
Sma3: Homeobox transcription factor KN3 0.0
Putative Complete
sp_v3.0_unigene19047 SustainPine v3.0 646
AutoFact: MADS-box protein n=3 Tax=Pinaceae RepID=O04406_PINRA 0.0
FL-Next: tr=MADS-box protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Fruitful-like MADS-box transcription factor 5.361e-25
Putative C-terminus
sp_v3.0_unigene19183 SustainPine v3.0 900
AutoFact: multiprotein-bridging factor 1c [Arabidopsis thaliana] sp|Q9LV58.1|MBF1C_ARATH RecName: Full=Multiprotein-bridging factor 1c dbj|BAB01997.1| ethylene-responsive transcriptional coactivator-like protein [Arabidopsis thaliana] gb|AAO44027.1| At3g24500 [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene19202 SustainPine v3.0 1839
AutoFact: WRKY DNA-binding protein 21 [Arabidopsis thaliana] sp|O04336.1|WRK21_ARATH RecName: Full=Probable WRKY transcription factor 21; AltName: Full=WRKY DNA-binding protein 21 gb|AAK28441.1|AF272747_1 WRKY DNA-binding protein 21 [Arabidopsis thaliana] gb|AAB630 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WRKY transcription factor, putative 6.802e-16
Complete
sp_v3.0_unigene19205 SustainPine v3.0 163
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene19228 SustainPine v3.0 342
AutoFact: Ser/Thr protein kinase isolog [Arabidopsis thaliana] 4.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene19496 SustainPine v3.0 1951
AutoFact: nuclear transcription factor Y subunit C-1 [Arabidopsis thaliana] sp|Q9SMP0.1|NFYC1_ARATH RecName: Full=Nuclear transcription factor Y subunit C-1; Short=AtNF-YC-1; AltName: Full=Transcriptional activator HAP5A emb|CAB62348.1| transcription factor Hap5a [ 9.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene19666 SustainPine v3.0 435
AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.651e-16
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain