Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding

Term: GO:0043565  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene15114 SustainPine v3.0 211
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene15431 SustainPine v3.0 316
• AutoFact: MADS-box transcription factor GbMADS10 n=1 Tax=Ginkgo biloba RepID=Q58A73_GINBI 5.0e-26
• FL-Next: tr=B-class MADS-box transcription factor; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: B-sister lineage-like protein BS 4.916e-10
C-terminus
sp_v3.0_unigene15454 SustainPine v3.0 797
• AutoFact: HB1 homeodomain protein [Populus tremula x Populus tremuloides] 1.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr4 scaffold_205, whole genome shotgun sequence 2.384e-06
N-terminus
sp_v3.0_unigene15589 SustainPine v3.0 1022
• AutoFact: putative receptor-like protein kinase [Arabidopsis thaliana] sp|O04086.1|Y1105_ARATH RecName: Full=Probable receptor-like protein kinase At1g11050; Flags: Precursor gb|AAB65477.1| Ser/Thr protein kinase isolog; 46094-44217 [Arabidopsis thaliana] gb|AEE286 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP binding protein, putative 3.036e-13
Complete
sp_v3.0_unigene15689 SustainPine v3.0 1100
• AutoFact: DEF/GLO-like protein n=1 Tax=Pinus radiata RepID=Q9M7M7_PINRA 0.0
• FL-Next: tr=DEF/GLO-like protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: DEF/GLO-like protein 0.0
Complete
sp_v3.0_unigene15715 SustainPine v3.0 562
• AutoFact: HSF domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJ32_MALDO 4.0e-10
• FL-Next: sp=Heat stress transcription factor B-4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene15727 SustainPine v3.0 705
• AutoFact: homeobox-leucine zipper protein HAT14 [Arabidopsis thaliana] sp|P46665.3|HAT14_ARATH RecName: Full=Homeobox-leucine zipper protein HAT14; AltName: Full=Homeodomain-leucine zipper protein HAT14; Short=HD-ZIP protein 14 dbj|BAE99427.1| homeobox protein [Ara 4.0e-34
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Sma3: Homeobox-leucine zipper protein ATHB-4 1.401e-16
Complete
sp_v3.0_unigene15752 SustainPine v3.0 472
• AutoFact: WRKY transcription factor 1 (Fragment) n=1 Tax=Picea abies RepID=B2KZJ7_PICAB 3.99931e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WRKY transcription factor, putative 7.932e-10
Internal
sp_v3.0_unigene15769 SustainPine v3.0 879
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: MYB transcription factor 2.378e-14
Complete
sp_v3.0_unigene15851 SustainPine v3.0 631
• AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RL32_RICCO 0.0
• FL-Next: tr=ATP-dependent RNA helicase, putative; Ricinus communis (Castor bean). 0.0
• Sma3: ATP-dependent RNA helicase, putative 7.085e-09
Internal
sp_v3.0_unigene15871 SustainPine v3.0 836
• AutoFact: Mini zinc finger 1 n=1 Tax=Welwitschia mirabilis RepID=B0LK08_WELMI 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Zinc finger homeodomain protein 1 5.147e-21
Complete
sp_v3.0_unigene15940 SustainPine v3.0 1782
• AutoFact: homeobox transcription factor Hox7-like protein [Oryza sativa Japonica Group] dbj|BAC79878.1| homeobox transcription factor Hox7-like protein [Oryza sativa Japonica Group] 4.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene16014 SustainPine v3.0 614
• AutoFact: pfam00249, Myb_DNA-binding, Myb-like DNA-binding domain 5.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA binding protein, putative 6.764e-07
Putative Complete
sp_v3.0_unigene16102 SustainPine v3.0 1245
• AutoFact: abscisic acid responsive element-binding protein 2 [Populus suaveolens] 6.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: BZIP transcription factor 7.415e-17
C-terminus
sp_v3.0_unigene16410 SustainPine v3.0 379
• AutoFact: serine/threonine protein kinase isolog [Arabidopsis thaliana] gb|AAO30076.1| serine/threonine protein kinase isolog [Arabidopsis thaliana] 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene16414 SustainPine v3.0 595
• AutoFact: putative MADS domain transcription factor GGM1 [Gnetum gnemon] 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS-box protein 4.585e-15
N-terminus
sp_v3.0_unigene16471 SustainPine v3.0 629
• AutoFact: Peptide transporter, putative n=1 Tax=Ricinus communis RepID=B9RGA9_RICCO 7.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 6.34e-28
C-terminus
sp_v3.0_unigene16509 SustainPine v3.0 890
• AutoFact: MADS-box transcription factor n=2 Tax=Picea abies RepID=Q9SEE0_PICAB 0.0
• FL-Next: tr=MADS-box transcription factor; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: MADS-box transcription factor 0.0
Putative Complete
sp_v3.0_unigene16654 SustainPine v3.0 1055
• AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS-box transcription factor 8.35e-22
Complete
sp_v3.0_unigene16675 SustainPine v3.0 973
• AutoFact: WRKY transcription factor, putative n=1 Tax=Ricinus communis RepID=B9S4T8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WRKY transcription factor, putative 1.994e-17
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain