Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding

Term: GO:0043565  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene12893 SustainPine v3.0 1181
• AutoFact: MADS-box transcription factor 18 n=4 Tax=Oryza sativa RepID=MAD18_ORYSJ 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene13003 SustainPine v3.0 580
• AutoFact: Homeobox 1 n=1 Tax=Picea abies RepID=Q9FR59_PICAB 0.0
• FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Homeobox protein, putative 3.409e-15
Internal
sp_v3.0_unigene13141 SustainPine v3.0 871
• AutoFact: Histone-fold/TFIID-TAF/NF-Y [Medicago truncatula] 8.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nuclear transcription factor Y subunit C-2 1.245e-22
Complete
sp_v3.0_unigene13283 SustainPine v3.0 1512
• AutoFact: Heat stress transcription factor A-1 n=4 Tax=Oryza sativa RepID=HSFA1_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock factor protein HSF8, putative 3.349e-08
C-terminus
sp_v3.0_unigene13451 SustainPine v3.0 1030
• AutoFact: mitochondrial pyruvate dehydrogenase kinase isoform 1 [Glycine max] gb|ABW03158.1| mitochondrial pyruvate dehydrogenase kinase isoform 1 [Pisum sativum] gb|ABW03159.1| mitochondrial pyruvate dehydrogenase kinase isoform 1 [Pisum sativum] gb|ABW03162.1| mi 0.0
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
• Sma3: Pyruvate dehydrogenase kinase 1.03e-21
N-terminus
sp_v3.0_unigene13475 SustainPine v3.0 779
• AutoFact: putative MADS-box family transcription factor [Pinus radiata] 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene13516 SustainPine v3.0 2970
• AutoFact: bZIP DNA-binding protein [Petroselinum crispum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription factor HBP-1a 1.03e-10
Complete
sp_v3.0_unigene13790 SustainPine v3.0 935
• AutoFact: DNA binding protein Rav [Capsicum annuum] 1.0e-35
• FL-Next: tr=APETALA2-related transcription factor 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Putative AP2 domain containing protein RAP2.8 8.198e-08
Internal
sp_v3.0_unigene13827 SustainPine v3.0 2894
• AutoFact: kinesin family member 22 [Arabidopsis thaliana] gb|AAX12877.1| At5g02370 [Arabidopsis thaliana] gb|AED90464.1| kinesin family member 22 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene13899 SustainPine v3.0 545
• AutoFact: Peptide transporter, putative n=1 Tax=Ricinus communis RepID=B9T755_RICCO 8.99999e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptide transporter 2.007e-18
N-terminus
sp_v3.0_unigene14158 SustainPine v3.0 914
• AutoFact: VQ motif-containing protein [Arabidopsis thaliana] gb|AAV97789.1| At1g28280 [Arabidopsis thaliana] gb|AAW38978.1| At1g28280 [Arabidopsis thaliana] gb|AEE30940.1| VQ motif-containing protein [Arabidopsis thaliana] 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: DNA-binding WRKY 1.195e-11
C-terminus
sp_v3.0_unigene14340 SustainPine v3.0 1089
• AutoFact: DUF679 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene14440 SustainPine v3.0 1152
• AutoFact: Os03g0758000 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q9AUV7_ORYSJ 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WRKY transcription factor, putative 3.366e-13
C-terminus
sp_v3.0_unigene14450 SustainPine v3.0 476
• AutoFact: WRKY transcription factor PmWRKY117 (Fragment) n=1 Tax=Pinus monticola RepID=E6Y3E9_PINMO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription factor WRKY16 4.873e-06
Internal
sp_v3.0_unigene14685 SustainPine v3.0 3179
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RCK4_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Loricrin-like 1.861e-12
Complete
sp_v3.0_unigene14775 SustainPine v3.0 575
• AutoFact: Unassigned protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene14863 SustainPine v3.0 1062
• AutoFact: Short-root n=1 Tax=Pinus radiata RepID=B4XI11_PINRA 0.0
• FL-Next: tr=Short-root; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: Putative SHORT-ROOT protein 3.223e-09
C-terminus
sp_v3.0_unigene14928 SustainPine v3.0 314
• AutoFact: Transporter ATM1, mitochondrial, putative n=1 Tax=Ricinus communis RepID=B9T3V9_RICCO 2.94273e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 1.159e-27
Internal
sp_v3.0_unigene14948 SustainPine v3.0 2177
• AutoFact: Homeodomain protein HB2 n=1 Tax=Picea abies RepID=Q8S555_PICAB 0.0
• FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Homeobox protein, putative 9.212e-13
C-terminus
sp_v3.0_unigene15030 SustainPine v3.0 545
• AutoFact: MADS-box protein JOINTLESS (Fragment) n=1 Tax=Picea abies RepID=B2KZI9_PICAB 9.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MPF2-like 2.966e-11
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain