Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: small GTPase mediated signal transduction

Term: GO:0007264  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene127356 SustainPine v3.0 558
AutoFact: Rab family GTPase n=3 Tax=Selaginella moellendorffii RepID=D8RE14_SELML 4.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative GTP-binding protein 4.579e-08
C-terminus
sp_v3.0_unigene127471 SustainPine v3.0 1067
AutoFact: PREDICTED: similar to Ras-related protein ORAB-1 n=1 Tax=Ciona intestinalis RepID=UPI0000523C85 1.0e-30
FL-Next: tr=Rab1; Pinus pinaster (Maritime pine). 0.0
Sma3: GTP-binding protein 7.73e-13
C-terminus
sp_v3.0_unigene127526 SustainPine v3.0 1700
AutoFact: Rop4 small GTP binding protein n=8 Tax=Embryophyta RepID=Q9XF08_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Small rho-1 GTP-binding protein 0.0
Complete
sp_v3.0_unigene127713 SustainPine v3.0 679
AutoFact: Ras-related protein Rab7 n=11 Tax=core eudicotyledons RepID=RAB7_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related protein Rab7 3.247e-16
N-terminus
sp_v3.0_unigene128350 SustainPine v3.0 987
AutoFact: ADP-ribosylation factor A1E [Arabidopsis thaliana] ref|NP_001190161.1| ADP-ribosylation factor A1E [Arabidopsis thaliana] ref|NP_001190162.1| ADP-ribosylation factor A1E [Arabidopsis thaliana] ref|XP_002880284.1| ADP-ribosylation factor A1E [Arabidopsis l 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ADP-ribosylation factor 1.127e-26
Misassembled
sp_v3.0_unigene129473 SustainPine v3.0 526
AutoFact: ADP-ribosylation factor 3 n=1 Tax=Zea mays RepID=B6UIH4_MAIZE 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ADP-ribosylation factor 3 2.058e-12
C-terminus
sp_v3.0_unigene129631 SustainPine v3.0 280
AutoFact: Rab family GTPase n=1 Tax=Selaginella moellendorffii RepID=D8R4N2_SELML 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene130002 SustainPine v3.0 492
AutoFact: putative tRNA modification GTPase trmE [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Probable tRNA modification GTPase mnmE; Cyanidioschyzon merolae (Red alga). Plastid; Chloroplast. 0.0
Internal
sp_v3.0_unigene132552 SustainPine v3.0 348
AutoFact: Rab family GTPase n=3 Tax=Selaginella moellendorffii RepID=D8RE14_SELML 8.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related protein Rab11C 1.272e-12
Putative N-terminus
sp_v3.0_unigene137685 SustainPine v3.0 382
AutoFact: Ras-related protein Rab-18 n=4 Tax=Poaceae RepID=B6TCF9_MAIZE 3.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene140846 SustainPine v3.0 581
AutoFact: putative ADP-ribosylation factor [Pinus pinaster] 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ADP-ribosylation factor 7.818e-07
C-terminus
sp_v3.0_unigene141306 SustainPine v3.0 480
AutoFact: small GTP-binding protein ROP1 [Vigna radiata] 6.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene141342 SustainPine v3.0 360
AutoFact: small GTP-binding protein [Glycine max] 8.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GTP-binding protein 1.809e-15
Internal
sp_v3.0_unigene142518 SustainPine v3.0 340
AutoFact: Rac-like GTP binding protein n=1 Tax=Picea mariana RepID=O65062_PICMA 2.0e-37
FL-Next: tr=Rac-like GTP binding protein; Picea mariana (Black spruce) (Abies mariana). 0.0
Sma3: Putative rac protein 1.271e-17
Putative C-terminus
sp_v3.0_unigene142637 SustainPine v3.0 470
AutoFact: ADP-ribosylation factor-like protein [Panax ginseng] 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ADP-ribosylation factor 3.875e-14
C-terminus
sp_v3.0_unigene144260 SustainPine v3.0 550
AutoFact: Rab family GTPase n=3 Tax=Selaginella moellendorffii RepID=D8RE14_SELML 6.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GTP-binding protein 2.902e-14
Misassembled
sp_v3.0_unigene146139 SustainPine v3.0 888
AutoFact: ADP-ribosylation factor [Hyacinthus orientalis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ADP-ribosylation factor 1.015e-26
Putative Complete
sp_v3.0_unigene146348 SustainPine v3.0 333
AutoFact: ADP-ribosylation factor A1E [Arabidopsis thaliana] ref|NP_001190161.1| ADP-ribosylation factor A1E [Arabidopsis thaliana] ref|NP_001190162.1| ADP-ribosylation factor A1E [Arabidopsis thaliana] ref|XP_002880284.1| ADP-ribosylation factor A1E [Arabidopsis l 6.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ADP-ribosylation factor, arf, putative 2.091e-14
C-terminus
sp_v3.0_unigene148487 SustainPine v3.0 402
AutoFact: Ras-related protein RABG3b n=2 Tax=Arabidopsis RepID=RAG3B_ARATH 8.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related protein Rab7 7.91e-20
N-terminus
sp_v3.0_unigene149276 SustainPine v3.0 278
AutoFact: RAS-related C3 botulinum substrate 1, isoform CRA_b [Mus musculus] 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative rac protein 2.681e-17
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain