Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: small GTPase mediated signal transduction

Term: GO:0007264  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene75834 SustainPine v3.0 471
• AutoFact: Rab family GTPase n=3 Tax=Selaginella moellendorffii RepID=D8RE14_SELML 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related protein Rab11A 5.3e-15
N-terminus
sp_v3.0_unigene76159 SustainPine v3.0 275
• AutoFact: CPS1 protein n=3 Tax=Agaricales RepID=A8N6U6_COPC7 4.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ADP-ribosylation factor, putative, expressed 4.239e-09
C-terminus
sp_v3.0_unigene76915 SustainPine v3.0 256
• AutoFact: Ras-related small GTPase Rab5 n=1 Tax=Gymnochlora stellata RepID=B5A4M2_GYMST 8.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Rab5/RabF-family small GTPase 6.934e-11
Internal
sp_v3.0_unigene77433 SustainPine v3.0 431
• AutoFact: ADP-ribosylation factor (Fragment) n=1 Tax=Gossypium barbadense RepID=Q6XD33_GOSBA 4.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ADP-ribosylation factor, arf, putative 1.792e-14
Putative N-terminus
sp_v3.0_unigene77533 SustainPine v3.0 457
• AutoFact: Rho GTPase Rho1 [Neosartorya fischeri NRRL 181] gb|EAW15910.1| Rho GTPase Rho1 [Neosartorya fischeri NRRL 181] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative rac protein 1.862e-17
Putative N-terminus
sp_v3.0_unigene77873 SustainPine v3.0 407
• AutoFact: small monomeric GTPase [Coprinopsis cinerea okayama7#130] gb|EAU86797.1| small monomeric GTPase [Coprinopsis cinerea okayama7#130] 0.0
• FL-Next: tr=Septum-promoting GTP-binding protein 1; Phytophthora infestans (strain T30-4) (Potato late blight fungus). 0.0
• Sma3: SGP1 monomeric G-protein 6.335e-06
Misassembled
sp_v3.0_unigene78872 SustainPine v3.0 274
• AutoFact: Rab-type small GTP-binding protein (Fragment) n=2 Tax=fabids RepID=Q9SXT6_CICAR 1.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related protein Rab7 7.349e-18
Misassembled
sp_v3.0_unigene79053 SustainPine v3.0 204
• AutoFact: ADP ribosylation factor 1, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5LJ98_9ALVE 7.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ADP-ribosylation factor 3.843e-20
Internal
sp_v3.0_unigene79209 SustainPine v3.0 377
• AutoFact: ADP-ribosylation factor n=1 Tax=Paxillus involutus RepID=Q4G2I7_PAXIN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ADP-ribosylation factor 4.61e-27
C-terminus
sp_v3.0_unigene80669 SustainPine v3.0 262
• AutoFact: [R] COG1100 GTPase SAR1 and related small G proteins 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative rac protein 1.996e-17
Putative N-terminus
sp_v3.0_unigene80794 SustainPine v3.0 239
• AutoFact: ADP-ribosylation factor-like protein [Panax ginseng] 5.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ADP-ribosylation factor 9.603e-12
C-terminus
sp_v3.0_unigene81274 SustainPine v3.0 293
• AutoFact: GTP-binding protein ypt5 [Lodderomyces elongisporus NRRL YB-4239] gb|EDK45438.1| GTP-binding protein ypt5 [Lodderomyces elongisporus NRRL YB-4239] 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene81347 SustainPine v3.0 229
• AutoFact: Rho GTPase Rac, putative [Penicillium marneffei ATCC 18224] gb|AAN77094.1| CDC42-like protein CflB [Penicillium marneffei] gb|EEA19598.1| Rho GTPase Rac, putative [Penicillium marneffei ATCC 18224] 4.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GTPase protein ROP4 4.061e-08
Internal
sp_v3.0_unigene94669 SustainPine v3.0 338
• AutoFact: cullin 3B [Arabidopsis thaliana] sp|Q9C9L0.1|CUL3B_ARATH RecName: Full=Cullin-3B; Short=AtCUL3b gb|AAG52544.1|AC013289_11 putative cullin; 66460-68733 [Arabidopsis thaliana] gb|AEE34961.1| cullin 3B [Arabidopsis thaliana] 3.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene112813 SustainPine v3.0 340
• AutoFact: putative tRNA modification GTPase trmE [Oryza sativa Japonica Group] 3.0e-37
• FL-Next: sp=Probable tRNA modification GTPase mnmE; Cyanidioschyzon merolae (Red alga). Plastid; Chloroplast. 0.0
Internal
sp_v3.0_unigene113271 SustainPine v3.0 620
• AutoFact: Rab family GTPase n=1 Tax=Selaginella moellendorffii RepID=D8RPN0_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Small GTP-binding protein 7.024e-22
N-terminus
sp_v3.0_unigene118698 SustainPine v3.0 358
• AutoFact: F28K19.23 n=2 Tax=Arabidopsis thaliana RepID=Q9SGZ9_ARATH 4.0e-31
• FL-Next: sp=Probable tRNA modification GTPase mnmE; Cyanidioschyzon merolae (Red alga). Plastid; Chloroplast. 0.0
Internal
sp_v3.0_unigene122407 SustainPine v3.0 1095
• AutoFact: Rab family GTPase n=3 Tax=Selaginella moellendorffii RepID=D8RE14_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene126229 SustainPine v3.0 740
• AutoFact: ADP-ribosylation factor [Oryza sativa Japonica Group] 9.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ADP-ribosylation factor 7.369e-27
Putative Complete
sp_v3.0_unigene127258 SustainPine v3.0 582
• AutoFact: Ras-related protein ric1 (Fragment) n=2 Tax=Oryza sativa Indica Group RepID=A6N1N5_ORYSI 7.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Small GTP-binding protein 4.215e-11
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain