Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: protein modification process

Term: GO:0006464  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene204443 SustainPine v3.0 275
AutoFact: Ubiquitin family protein n=1 Tax=Trichinella spiralis RepID=E5RYS0_TRISP 4.99983e-42
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative Complete
sp_v3.0_unigene204483 SustainPine v3.0 179
AutoFact: ATP-dependent RNA helicase-like protein [Oryza sativa Japonica Group] dbj|BAD32021.1| ATP-dependent RNA helicase-like protein [Oryza sativa Japonica Group] 2.0e-09
FL-Next: tr=Predicted protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Internal
sp_v3.0_unigene204512 SustainPine v3.0 562
AutoFact: Ubiquitin/ribosomal protein L40 fusion n=1 Tax=Bigelowiella natans RepID=Q7X739_BIGNA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin/ribosomal protein L40 fusion 0.0
Complete
sp_v3.0_unigene204670 SustainPine v3.0 530
AutoFact: Ubiquitin-60S ribosomal protein L40 n=93 Tax=Eukaryota RepID=RL40_DROME 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L40 0.0
Putative Complete
sp_v3.0_unigene204756 SustainPine v3.0 455
AutoFact: Ubiquitin n=1 Tax=Paracoccidioides brasiliensis Pb03 RepID=C0SFI2_PARBP 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin fusion protein, putative, expressed 0.0
Complete
sp_v3.0_unigene205028 SustainPine v3.0 288
AutoFact: Ubiquitin n=2 Tax=Ciona RepID=Q8MY15_CIOSA 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene205715 SustainPine v3.0 511
AutoFact: ubiquitin fusion protein [Sclerotinia sclerotiorum 1980] gb|EDN96945.1| ubiquitin fusion protein [Sclerotinia sclerotiorum 1980 UF-70] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene206625 SustainPine v3.0 379
AutoFact: Ubiquitin/ribosomal fusion protein n=1 Tax=Loa loa RepID=E1FY98_LOALO 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene206756 SustainPine v3.0 488
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_36.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=E0CU91_VITVI 1.0e-30
FL-Next: sp=Ubiquitin; Avena sativa (Oat). 0.0
Complete
sp_v3.0_unigene206970 SustainPine v3.0 576
AutoFact: Actin-2 n=10 Tax=Bilateria RepID=F1L3U5_ASCSU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 2.386e-32
C-terminus
sp_v3.0_unigene207703 SustainPine v3.0 914
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polyubiquitin 0.0
Putative Complete
sp_v3.0_unigene207709 SustainPine v3.0 810
AutoFact: small ubiquitin-related modifier 1 [Arabidopsis thaliana] sp|P55852.2|SUMO1_ARATH RecName: Full=Small ubiquitin-related modifier 1; Short=AtSUMO1; AltName: Full=Ubiquitin-like protein SMT3 emb|CAB36530.1| ubiquitin-like protein [Arabidopsis thaliana] emb| 4.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin-like protein SMT3 6.852e-16
Putative Complete
sp_v3.0_unigene207797 SustainPine v3.0 528
AutoFact: Actin-11 n=180 Tax=Spermatophyta RepID=ACT11_ARATH 0.0
FL-Next: tr=Actin 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Actin 2.031e-37
Putative C-terminus
sp_v3.0_unigene207816 SustainPine v3.0 491
AutoFact: Actin, putative n=2 Tax=core eudicotyledons RepID=B9SXZ5_RICCO 0.0
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Sma3: Actin 1.792e-09
N-terminus
sp_v3.0_unigene208166 SustainPine v3.0 123
AutoFact: ORF MSV144 putative ubiquitin, similar to Neurospora crassa GB:U01220 n=1 Tax=Melanoplus sanguinipes entomopoxvirus RepID=Q9YVU8_MSEPV 1.0e-11
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Internal
sp_v3.0_unigene208487 SustainPine v3.0 816
AutoFact: Ubiquitin [Medicago truncatula] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Bi-ubiquitin 1.764e-08
Complete
sp_v3.0_unigene208489 SustainPine v3.0 1000
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Bi-ubiquitin 1.725e-08
Putative Complete
sp_v3.0_unigene208500 SustainPine v3.0 629
AutoFact: polyubiquitin [Pinus sylvestris] 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Bi-ubiquitin 1.751e-08
Putative Complete
sp_v3.0_unigene208501 SustainPine v3.0 659
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Hexameric polyubiquitin 6PU11; Capsicum annuum (Bell pepper). 0.0
Sma3: Polyubiquitin 1.014e-07
Complete
sp_v3.0_unigene208535 SustainPine v3.0 733
AutoFact: NIF domain containing protein 5.0e-05
FL-Next: sp=Ubiquitin-like domain-containing CTD phosphatase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain