Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: protein modification process

Term: GO:0006464  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene159412 SustainPine v3.0 248
• AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH 2.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin 4.485e-09
Putative C-terminus
sp_v3.0_unigene159833 SustainPine v3.0 440
• AutoFact: PREDICTED: similar to KAK (KAKTUS) isoform 1 n=2 Tax=Vitis vinifera RepID=UPI0001982DD6 9.0e-29
• FL-Next: sp=E3 ubiquitin-protein ligase UPL3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene160210 SustainPine v3.0 430
• AutoFact: Ubiquitin n=1 Tax=Metarhizium acridum CQMa 102 RepID=E9DYE5_METAQ 4.0e-36
• FL-Next: sp=Ubiquitin; Lupinus polyphyllus (Large-leaved lupin). 0.0
Complete
sp_v3.0_unigene161457 SustainPine v3.0 117
• AutoFact: [O] COG5272 Ubiquitin 6.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene161490 SustainPine v3.0 352
• AutoFact: Unassigned protein
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene161531 SustainPine v3.0 422
• AutoFact: Actin-like protein (Centractin) n=4 Tax=Hypocreales RepID=E9E4X9_METAQ 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Actin-2 5.895e-07
N-terminus
sp_v3.0_unigene162797 SustainPine v3.0 302
• AutoFact: ubiquitin-like protein [Pisum sativum] 6.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin-like protein SMT3 7.912e-16
C-terminus
sp_v3.0_unigene163249 SustainPine v3.0 364
• AutoFact: basic helix-loop-helix (bHLH) family protein 9.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: BHLH transcription factor 1.049e-09
Internal
sp_v3.0_unigene164113 SustainPine v3.0 295
• AutoFact: ubiquitin extension protein [Capsicum annuum] 3.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene164520 SustainPine v3.0 309
• AutoFact: ubiquitin-like protein [Arabidopsis thaliana] gb|AAC36185.1| hypothetical protein [Arabidopsis thaliana] gb|AAO37158.1| hypothetical protein [Arabidopsis thaliana] gb|AAT69178.1| hypothetical protein At2g35360 [Arabidopsis thaliana] gb|AEC09099.1| ubiquit 4.0e-27
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene164940 SustainPine v3.0 375
• AutoFact: bHLH transcription factor PTF1 [Zea mays] gb|ABF13333.1| bHLH transcription factor PTF1 [Zea mays] 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: BHLH transcription factor 3.949e-20
Internal
sp_v3.0_unigene165389 SustainPine v3.0 170
• AutoFact: Actin-2 n=10 Tax=Bilateria RepID=F1L3U5_ASCSU 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Actin 3.694e-16
Putative C-terminus
sp_v3.0_unigene165653 SustainPine v3.0 267
• AutoFact: Ubiquitin-activating enzyme E1 n=2 Tax=Physcomitrella patens subsp. patens RepID=A9REZ6_PHYPA 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene165655 SustainPine v3.0 369
• AutoFact: 60S ribosomal protein L40 n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9S759_VERA1 7.9874e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CEP52 3.796e-07
C-terminus
sp_v3.0_unigene165854 SustainPine v3.0 431
• AutoFact: Polyubiquitin 2 (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00UH7_OSTTA 9.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin 1.381e-09
Complete
sp_v3.0_unigene165955 SustainPine v3.0 117
• AutoFact: Ubiquitin family protein n=1 Tax=Trichinella spiralis RepID=E5RYR3_TRISP 1.0e-11
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative C-terminus
sp_v3.0_unigene166365 SustainPine v3.0 242
• AutoFact: putative DNA replication licensing factor [Arabidopsis thaliana] 1.0e-22
• FL-Next: sp=Protein PROLIFERA; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Minichromosome maintenance protein 2.626e-10
Internal
sp_v3.0_unigene166732 SustainPine v3.0 523
• AutoFact: Probable ubiquitin/ribosomal protein S27a fusion protein n=2 Tax=Ustilaginaceae RepID=E6ZP53_9BASI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin extension protein 0.0
Complete
sp_v3.0_unigene166765 SustainPine v3.0 265
• AutoFact: Probable ubiquitin/ribosomal protein S27a fusion protein n=2 Tax=Ustilaginaceae RepID=E6ZP53_9BASI 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S27a 2.046e-06
Internal
sp_v3.0_unigene167184 SustainPine v3.0 359
• AutoFact: Putative ubiquitin extension protein (Fragment) n=1 Tax=Brassica rapa RepID=Q39408_BRACM 4.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin 3.92e-10
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain