Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: protein modification process

Term: GO:0006464  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene52826 SustainPine v3.0 335
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative Complete
sp_v3.0_unigene52954 SustainPine v3.0 437
AutoFact: polyubiquitin [Triticum aestivum] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin 9.912e-08
Putative Complete
sp_v3.0_unigene52982 SustainPine v3.0 219
AutoFact: Ubiquitin-ribosomal protein fusion S27a n=1 Tax=Candida albicans RepID=Q5A109_CANAL 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene52992 SustainPine v3.0 332
AutoFact: ubiquitin extension protein [Capsicum annuum] 3.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene53011 SustainPine v3.0 345
AutoFact: putative DNA repair protein RAD23-1 [Arabidopsis thaliana] gb|AEE36280.1| putative DNA repair protein RAD23-1 [Arabidopsis thaliana] 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Uv excision repair protein rad23, putative 1.884e-11
Putative Complete
sp_v3.0_unigene53090 SustainPine v3.0 326
AutoFact: Actin-18 n=1 Tax=Dictyostelium discoideum RepID=ACT18_DICDI 3.0e-33
FL-Next: tr=Actin 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Actin 2.326e-08
Internal
sp_v3.0_unigene53228 SustainPine v3.0 259
AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Picea sitchensis RepID=A9NUT3_PICSI 3.0e-20
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase 3.901e-16
N-terminus
sp_v3.0_unigene53351 SustainPine v3.0 235
AutoFact: ubiquitin extension protein [Capsicum annuum] 4.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene53466 SustainPine v3.0 440
AutoFact: Ribosomal L40e family protein [Tetrahymena thermophila] gb|EAR97381.1| Ribosomal L40e family protein [Tetrahymena thermophila SB210] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene53479 SustainPine v3.0 301
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_36.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=E0CU91_VITVI 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene53594 SustainPine v3.0 388
AutoFact: PREDICTED: similar to E3 ubiquitin-protein ligase UPL1 n=1 Tax=Vitis vinifera RepID=UPI00019857DB 2.0e-34
FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene53691 SustainPine v3.0 424
AutoFact: ubiquitin activating enzyme E1 [Cicer arietinum] 7.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin-activating enzyme E1 7.84727e-44
C-terminus
sp_v3.0_unigene53829 SustainPine v3.0 449
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin 9.465e-08
Putative Complete
sp_v3.0_unigene54202 SustainPine v3.0 126
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 3.0e-09
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
C-terminus
sp_v3.0_unigene54348 SustainPine v3.0 225
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polyubiquitin 8.308e-08
Internal
sp_v3.0_unigene54746 SustainPine v3.0 169
AutoFact: ubiquitin [Musa acuminata AAA Group] 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene54753 SustainPine v3.0 213
AutoFact: ubiquitin [Aspergillus clavatus NRRL 1] gb|EAW09700.1| ubiquitin [Aspergillus clavatus NRRL 1] 5.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene54769 SustainPine v3.0 418
AutoFact: polyubiquitin [Pinus sylvestris] 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Polyubiquitin 9.14e-08
Putative Complete
sp_v3.0_unigene54911 SustainPine v3.0 413
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Polyubiquitin 9.14e-08
Putative Complete
sp_v3.0_unigene54932 SustainPine v3.0 205
AutoFact: Ubiquitin, putative n=5 Tax=Chromadorea RepID=A8NSV0_BRUMA 8.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain