Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ubiquitin-dependent protein catabolic process

Term: GO:0006511  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene199981 SustainPine v3.0 576
• AutoFact: Ubiquitin carrier protein n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CCJ9_9EUKA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 1.88615e-42
Putative Complete
sp_v3.0_unigene200326 SustainPine v3.0 288
• AutoFact: Proteasome subunit beta type n=1 Tax=Naegleria gruberi RepID=D2VBJ0_NAEGR 1.0e-33
• FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene200329 SustainPine v3.0 495
• AutoFact: Proteasome subunit alpha type n=2 Tax=Onchocercidae RepID=E1FL02_LOALO 0.0
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 4.05e-28
Internal
sp_v3.0_unigene200352 SustainPine v3.0 262
• AutoFact: Ubiquitin carrier protein n=1 Tax=Toxoplasma gondii RepID=B9PV70_TOXGO 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 0.0
N-terminus
sp_v3.0_unigene200447 SustainPine v3.0 344
• AutoFact: Proteasome subunit beta type n=1 Tax=Chlorella variabilis RepID=E1Z8Y2_9CHLO 2.0e-38
• FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit beta type-6 4.947e-08
C-terminus
sp_v3.0_unigene200536 SustainPine v3.0 310
• AutoFact: Proteasome subunit alpha type-4 (Fragment) n=4 Tax=Chromadorea RepID=F1LDS6_ASCSU 2.0e-33
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 6.305e-28
N-terminus
sp_v3.0_unigene200850 SustainPine v3.0 301
• AutoFact: ubiquitin thiolesterase [Arabidopsis thaliana] gb|AAQ65163.1| At4g08940 [Arabidopsis thaliana] dbj|BAD43049.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82698.1| ubiquitin thiolesterase [Arabidopsis thaliana] 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene201984 SustainPine v3.0 953
• AutoFact: Tryp_alpha_amyl domain containing protein 8.0e-12
• FL-Next: tr=Proline-rich protein; Pinus taeda (Loblolly pine). 0.0
• Sma3: 36.4 kDa proline-rich protein 3.928e-10
Complete
sp_v3.0_unigene202293 SustainPine v3.0 992
• AutoFact: Tryp_alpha_amyl domain containing protein 5.0e-13
• FL-Next: tr=Proline-rich protein; Pinus taeda (Loblolly pine). 0.0
• Sma3: 36.4 kDa proline-rich protein 2.275e-13
Complete
sp_v3.0_unigene202329 SustainPine v3.0 832
• AutoFact: Thioredoxin H-type n=5 Tax=Picea RepID=TRXH_PICMA 9.0e-25
• FL-Next: sp=Thioredoxin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Thioredoxin h 0.0
Putative Complete
sp_v3.0_unigene202405 SustainPine v3.0 684
• AutoFact: DUF659 domain containing protein 2.0e-10
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene202606 SustainPine v3.0 399
• AutoFact: DUF659 domain containing protein 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene202761 SustainPine v3.0 510
• AutoFact: Histone-like transcription factor n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N154_MICPC 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ccaat-binding transcription factor subunit A, putative 3.16e-36
C-terminus
sp_v3.0_unigene203045 SustainPine v3.0 531
• AutoFact: SCF ubiquitin ligase complex protein SKP1a n=3 Tax=Dictyostelium RepID=SKP1A_DICDI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fimbriata-associated protein 6.642e-23
Complete
sp_v3.0_unigene203088 SustainPine v3.0 407
• AutoFact: cullin 1A [Nicotiana tabacum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cullin-1, putative 1.687e-08
Internal
sp_v3.0_unigene203270 SustainPine v3.0 393
• AutoFact: DUF659 domain containing protein 7.0e-38
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene203308 SustainPine v3.0 282
• AutoFact: DUF659 domain containing protein 8.0e-33
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene203372 SustainPine v3.0 577
• AutoFact: putative ubiquitin-protein ligase 1 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: E3 ubiquitin protein ligase upl2, putative 1.155e-08
Putative C-terminus
sp_v3.0_unigene203553 SustainPine v3.0 494
• AutoFact: Cullin 1A n=2 Tax=Nicotiana tabacum RepID=Q711G8_TOBAC 4.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative cullin protein 6.866e-12
C-terminus
sp_v3.0_unigene203619 SustainPine v3.0 627
• AutoFact: SCF ubiquitin ligase complex protein SKP1a n=3 Tax=Dictyostelium RepID=SKP1A_DICDI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fimbriata-associated protein 6.509e-23
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain