Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ubiquitin-dependent protein catabolic process

Term: GO:0006511  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene192341 SustainPine v3.0 533
• AutoFact: Cytosolic glycoprotein FP21 n=2 Tax=Dictyosteliida RepID=D3B7B4_POLPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fimbriata-associated protein 4.935e-23
Complete
sp_v3.0_unigene192377 SustainPine v3.0 377
• AutoFact: PREDICTED: ubiquitin-conjugating enzyme E2 N-like n=1 Tax=Mus musculus RepID=UPI0001E6B547 3.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 0.0
C-terminus
sp_v3.0_unigene192390 SustainPine v3.0 699
• AutoFact: S-phase kinase-associated protein 1A n=2 Tax=root RepID=D0MV20_PHYIT 5.99994e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Kinetochore protein 1.238e-12
Complete
sp_v3.0_unigene192427 SustainPine v3.0 382
• AutoFact: Phosphatase-like protein n=1 Tax=Leishmania braziliensis MHOM/BR/75/M2904 RepID=E9AIL2_LEIBR 5.0e-21
• FL-Next: sp=Protein SGT1 homolog; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: SGT1 1.187e-14
C-terminus
sp_v3.0_unigene192534 SustainPine v3.0 538
• AutoFact: PREDICTED: similar to TRIP12 protein, partial n=2 Tax=Hydra magnipapillata RepID=UPI00019248C9 5.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative HECT ubiquitin-protein ligase 3 7.738e-09
C-terminus
sp_v3.0_unigene192558 SustainPine v3.0 306
• AutoFact: Proteasome subunit beta type n=1 Tax=Ectocarpus siliculosus RepID=D8LRR1_ECTSI 3.0e-20
• FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene192588 SustainPine v3.0 459
• AutoFact: Proteasome subunit alpha type n=3 Tax=Physcomitrella patens subsp. patens RepID=A9SPF1_PHYPA 0.0
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 2.22806e-43
C-terminus
sp_v3.0_unigene192627 SustainPine v3.0 430
• AutoFact: Proteasome subunit alpha type 5 n=1 Tax=Naegleria gruberi RepID=D2UXR2_NAEGR 4.06377e-44
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 4.301e-18
Internal
sp_v3.0_unigene192649 SustainPine v3.0 568
• AutoFact: Ubiquitinconjugating enzyme E2 putative n=1 Tax=Albugo laibachii Nc14 RepID=F0W5U0_9STRA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 0.0
Complete
sp_v3.0_unigene192741 SustainPine v3.0 569
• AutoFact: Ubiquitin-conjugating enzyme E2 2 n=8 Tax=Bilateria RepID=UBC2_CAEEL 0.0
• FL-Next: tr=Putative ubiquitin-conjugating enzyme; Porphyra yezoensis. 0.0
• Sma3: Ubiquitin carrier protein 0.0
Complete
sp_v3.0_unigene192883 SustainPine v3.0 341
• AutoFact: Cullin-3 n=1 Tax=Dictyostelium discoideum RepID=CUL3_DICDI 3.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cullin 1.233e-10
C-terminus
sp_v3.0_unigene193178 SustainPine v3.0 306
• AutoFact: Proteasome subunit beta type n=1 Tax=Chlamydomonas reinhardtii RepID=A8J212_CHLRE 1.0e-26
• FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene193281 SustainPine v3.0 751
• AutoFact: Proteasome subunit alpha type n=1 Tax=Nematostella vectensis RepID=A7RIX7_NEMVE 0.0
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 0.0
Putative Complete
sp_v3.0_unigene193888 SustainPine v3.0 281
• AutoFact: Contains similarity to ubiquitin carboxyl-terminal hydrolase 14 gb|Z35927 from S. cerevisiae [Arabidopsis thaliana] 5.0e-14
• FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene196041 SustainPine v3.0 398
• AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=D5A9Q7_PICSI 4.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 6.766e-15
N-terminus
sp_v3.0_unigene198240 SustainPine v3.0 764
• AutoFact: Ubiquitin carrier protein n=1 Tax=Schizophyllum commune H4-8 RepID=D8QFI2_SCHCM 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 1.88615e-42
Complete
sp_v3.0_unigene199495 SustainPine v3.0 164
• AutoFact: cullin 3B [Arabidopsis thaliana] sp|Q9C9L0.1|CUL3B_ARATH RecName: Full=Cullin-3B; Short=AtCUL3b gb|AAG52544.1|AC013289_11 putative cullin; 66460-68733 [Arabidopsis thaliana] gb|AEE34961.1| cullin 3B [Arabidopsis thaliana] 5.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene199644 SustainPine v3.0 500
• AutoFact: Ubiquitin carrier protein n=1 Tax=Naegleria gruberi RepID=D2W400_NAEGR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 1.88615e-42
N-terminus
sp_v3.0_unigene199714 SustainPine v3.0 350
• AutoFact: alpha 2 subunit of 20S proteasome (ISS) [Ostreococcus tauri] emb|CAL53282.1| alpha 2 subunit of 20S proteasome (ISS) [Ostreococcus tauri] 4.0e-39
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 2.095e-10
C-terminus
sp_v3.0_unigene199945 SustainPine v3.0 228
• AutoFact: Ubiquitin carrier protein n=2 Tax=Entamoeba RepID=B0ERM7_ENTDI 5.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 7.00649e-45
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain