Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ubiquitin-dependent protein catabolic process

Term: GO:0006511  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene166788 SustainPine v3.0 211
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 3.373e-09
Internal
sp_v3.0_unigene166932 SustainPine v3.0 167
• AutoFact: DUF659 domain containing protein 3.0e-21
• FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene167002 SustainPine v3.0 251
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 3.191e-23
Putative N-terminus
sp_v3.0_unigene167077 SustainPine v3.0 127
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene167413 SustainPine v3.0 213
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S079_RICCO 1.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative 1.029e-07
Putative C-terminus
sp_v3.0_unigene167562 SustainPine v3.0 86
• AutoFact: Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Selaginella moellendorffii RepID=D8QXT9_SELML 3.0e-07
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Ubiquitin carboxyl-terminal hydrolase 4.705e-11
Internal
sp_v3.0_unigene167644 SustainPine v3.0 186
• AutoFact: ubiquitin protein ligase E3A [Siniperca chuatsi] 4.0e-10
• FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene167723 SustainPine v3.0 172
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tetratricopeptide-like helical 4.951e-10
Internal
sp_v3.0_unigene168095 SustainPine v3.0 256
• AutoFact: ubiquitin carboxyl-terminal hydrolase 17 [Arabidopsis thaliana] sp|Q9FKP5.1|UBP17_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17; AltName: Full=Deubiquitinating enzyme 17; Short=AtUBP17; AltName: Full=Ubiquitin thiolesterase 17; AltName: Ful 2.0e-15
• FL-Next: Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 17 OS=Arabidopsis thaliana GN=UBP17 0.0
• Sma3: Putative ubiquitin-specific protease 3.176e-12
Internal
sp_v3.0_unigene168172 SustainPine v3.0 276
• AutoFact: SKP1 n=1 Tax=Pellia endiviifolia (species B) RepID=C9WCK3_9MARC 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fimbriata-associated protein 1.077e-13
Internal
sp_v3.0_unigene183075 SustainPine v3.0 637
• AutoFact: ubiquitin-conjugating enzyme family protein [Entamoeba histolytica HM-1:IMSS] gb|EAL42926.1| ubiquitin-conjugating enzyme family protein [Entamoeba histolytica HM-1:IMSS] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 6.378e-36
Complete
sp_v3.0_unigene183575 SustainPine v3.0 436
• AutoFact: elongation factor SIII p15 subunit, putative [Aedes aegypti] gb|EAT43917.1| elongation factor SIII p15 subunit, putative [Aedes aegypti] 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Volvox carteri (Green alga). 0.0
• Sma3: Elongin C 2.282e-13
Complete
sp_v3.0_unigene183589 SustainPine v3.0 517
• AutoFact: ubiquitin-protein ligase 1, putative [Toxoplasma gondii RH] 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: E3 ubiquitin-protein ligase 4.289e-10
C-terminus
sp_v3.0_unigene185598 SustainPine v3.0 1146
• AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U1S0_PHYPA 9.99967e-42
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
• Sma3: Predicted protein 0.0
Complete
sp_v3.0_unigene185988 SustainPine v3.0 545
• AutoFact: SCF ubiquitin ligase complex protein SKP1a n=3 Tax=Dictyostelium RepID=SKP1A_DICDI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fimbriata-associated protein 5.406e-23
Complete
sp_v3.0_unigene186045 SustainPine v3.0 582
• AutoFact: Ubiquitin carrier protein n=2 Tax=Bacillariophyta RepID=B7G7K7_PHATC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 0.0
Complete
sp_v3.0_unigene186074 SustainPine v3.0 649
• AutoFact: Ubiquitin carrier protein n=1 Tax=Aspergillus flavus NRRL3357 RepID=B8NV39_ASPFN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 0.0
C-terminus
sp_v3.0_unigene186435 SustainPine v3.0 436
• AutoFact: Proteasome subunit alpha type n=1 Tax=Chlorella variabilis RepID=E1ZCR2_9CHLO 0.0
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 6.845e-13
N-terminus
sp_v3.0_unigene186476 SustainPine v3.0 954
• AutoFact: DUF659 domain containing protein 9.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA binding protein, putative 3.017e-08
Putative N-terminus
sp_v3.0_unigene186477 SustainPine v3.0 644
• AutoFact: DUF659 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA binding protein, putative 2.652e-06
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain