Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ubiquitin-dependent protein catabolic process

Term: GO:0006511  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene158701 SustainPine v3.0 603
• AutoFact: Proteasome subunit alpha type-3 (Fragment) n=1 Tax=Acanthamoeba castellanii RepID=PSA3_ACACA 0.0
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 4.226e-36
N-terminus
sp_v3.0_unigene158756 SustainPine v3.0 379
• AutoFact: Proteasome subunit beta type n=1 Tax=Eptatretus stoutii RepID=C9K0Z2_EPTST 1.0e-31
• FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene158796 SustainPine v3.0 398
• AutoFact: Proteasome subunit alpha type-3 (Fragment) n=1 Tax=Acanthamoeba castellanii RepID=PSA3_ACACA 0.0
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 4.476e-28
Putative C-terminus
sp_v3.0_unigene158886 SustainPine v3.0 267
• AutoFact: proteasome component PUP2 [Meyerozyma guilliermondii ATCC 6260] gb|EDK39981.1| proteasome component PUP2 [Meyerozyma guilliermondii ATCC 6260] 2.0e-15
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha 9.26e-06
C-terminus
sp_v3.0_unigene158899 SustainPine v3.0 142
• AutoFact: Proteasome subunit alpha type n=2 Tax=core eudicotyledons RepID=Q38HU2_SOLTU 1.0e-09
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene158902 SustainPine v3.0 471
• AutoFact: proteasome subunit alpha type-2-B [Arabidopsis thaliana] ref|NP_001077845.1| proteasome subunit alpha type-2-B [Arabidopsis thaliana] ref|NP_001077846.1| proteasome subunit alpha type-2-B [Arabidopsis thaliana] sp|Q8L4A7.1|PSA2B_ARATH RecName: Full=Protea 0.0
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 2.095e-10
C-terminus
sp_v3.0_unigene158991 SustainPine v3.0 507
• AutoFact: Proteasome subunit beta type-5 n=2 Tax=Dictyostelium RepID=PSB5_DICDI 0.0
• FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit beta type 5 1.949e-08
Putative N-terminus
sp_v3.0_unigene158994 SustainPine v3.0 259
• AutoFact: Proteasome subunit alpha type n=2 Tax=Salmo salar RepID=B5XDD4_SALSA 1.0e-26
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 3.662e-28
N-terminus
sp_v3.0_unigene159056 SustainPine v3.0 280
• AutoFact: Proteasome subunit alpha type n=3 Tax=Agaricales RepID=B0D3V9_LACBS 2.0e-32
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 5.581e-38
N-terminus
sp_v3.0_unigene159061 SustainPine v3.0 295
• AutoFact: Proteasome subunit alpha type n=3 Tax=Physcomitrella patens subsp. patens RepID=A9T0H6_PHYPA 7.0e-34
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 0.0
N-terminus
sp_v3.0_unigene159085 SustainPine v3.0 286
• AutoFact: Ubiquitin carrier protein n=10 Tax=Arthropoda RepID=D6WGX5_TRICA 6.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 1.702e-33
Putative N-terminus
sp_v3.0_unigene159171 SustainPine v3.0 321
• AutoFact: Proteasome subunit alpha type n=1 Tax=Polysphondylium pallidum RepID=D3BHC9_POLPA 2.0e-18
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 2.098e-39
N-terminus
sp_v3.0_unigene159229 SustainPine v3.0 223
• AutoFact: Proteasome subunit alpha type n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RC85_PHYPA 4.0e-18
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 6.335e-13
N-terminus
sp_v3.0_unigene159380 SustainPine v3.0 125
• AutoFact: Putative cullin protein (Fragment) n=1 Tax=Olea europaea RepID=Q93YY3_OLEEU 1.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative cullin protein 1.056e-13
Internal
sp_v3.0_unigene159445 SustainPine v3.0 391
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070 gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana] gb|AEC07259.1| pentatricopeptide repe 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 4.908e-09
Putative C-terminus
sp_v3.0_unigene159601 SustainPine v3.0 105
• AutoFact: putative E3 ubiquitin-protein ligase SINA-like 6 [Arabidopsis thaliana] sp|Q9FKD9.1|SINL6_ARATH RecName: Full=Putative E3 ubiquitin-protein ligase SINA-like 6; AltName: Full=Seven in absentia-like protein 6 dbj|BAB09033.1| unnamed protein product [Arabido 8.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene159732 SustainPine v3.0 224
• AutoFact: DUF659 domain containing protein 8.0e-29
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene159833 SustainPine v3.0 440
• AutoFact: PREDICTED: similar to KAK (KAKTUS) isoform 1 n=2 Tax=Vitis vinifera RepID=UPI0001982DD6 9.0e-29
• FL-Next: sp=E3 ubiquitin-protein ligase UPL3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene160153 SustainPine v3.0 240
• AutoFact: Putative ubiquitin-conjugating enzyme E2 n=1 Tax=Dictyostelium fasciculatum RepID=F4Q3I2_9MYCE 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 0.0
Putative C-terminus
sp_v3.0_unigene160240 SustainPine v3.0 277
• AutoFact: Proteasome subunit alpha type n=1 Tax=Picea sitchensis RepID=A9NKR6_PICSI 8.0e-16
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 1.247e-17
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain