Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ubiquitin-dependent protein catabolic process

Term: GO:0006511  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene157640 SustainPine v3.0 220
• AutoFact: Ubiquitin-conjugating enzyme E2-17 kDa n=1 Tax=Acromyrmex echinatior RepID=F4WW03_9HYME 1.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 0.0
Putative N-terminus
sp_v3.0_unigene157672 SustainPine v3.0 370
• AutoFact: PREDICTED: proteasome beta 7 subunit-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CB9F10 8.0e-36
• FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene157678 SustainPine v3.0 136
• AutoFact: Proteasome subunit alpha type n=2 Tax=Entamoeba RepID=B0EPR2_ENTDI 5.0e-11
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 5.406e-13
N-terminus
sp_v3.0_unigene157719 SustainPine v3.0 340
• AutoFact: SCF ubiquitin ligase complex protein SKP1a n=3 Tax=Dictyostelium RepID=SKP1A_DICDI 7.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene157846 SustainPine v3.0 304
• AutoFact: Ubiquitin carrier protein n=1 Tax=Anopheles darlingi RepID=E3X124_ANODA 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 1.88615e-42
C-terminus
sp_v3.0_unigene157919 SustainPine v3.0 407
• AutoFact: Enolase n=1 Tax=Nicotiana tabacum RepID=C5J0G6_TOBAC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Enolase 0.0
Internal
sp_v3.0_unigene158038 SustainPine v3.0 369
• AutoFact: PREDICTED: similar to Proteasome subunit alpha type 6 (Proteasome iota chain) (Macropain iota chain) (Multicatalytic endopeptidase complex iota chain) isoform 4 n=2 Tax=Eutheria RepID=UPI00005A16D6 8.0e-35
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 7.28675e-44
N-terminus
sp_v3.0_unigene158060 SustainPine v3.0 441
• AutoFact: Proteasome subunit alpha type n=1 Tax=Branchiostoma floridae RepID=C3Z0Z0_BRAFL 0.0
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 0.0
N-terminus
sp_v3.0_unigene158079 SustainPine v3.0 269
• AutoFact: Proteasome subunit beta type n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CF12_9EUKA 7.0e-24
• FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit beta type-6 6.824e-08
N-terminus
sp_v3.0_unigene158115 SustainPine v3.0 313
• AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U1S0_PHYPA 3.0e-34
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
• Sma3: Predicted protein 0.0
Putative Complete
sp_v3.0_unigene158148 SustainPine v3.0 158
• AutoFact: Enolase n=1 Tax=Heterorhabditis indica RepID=D7RIF0_9BILA 6.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Enolase 0.0
C-terminus
sp_v3.0_unigene158200 SustainPine v3.0 381
• AutoFact: Proteasome subunit alpha type n=1 Tax=Ectocarpus siliculosus RepID=D7G614_ECTSI 0.0
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 1.719e-37
N-terminus
sp_v3.0_unigene158284 SustainPine v3.0 431
• AutoFact: 20S proteasome subunit C2 n=1 Tax=Dictyostelium fasciculatum RepID=F4PYC7_9MYCE 3.00004e-41
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 7.407e-28
Internal
sp_v3.0_unigene158307 SustainPine v3.0 473
• AutoFact: Proteasome subunit alpha type n=1 Tax=Picea sitchensis RepID=A9NP38_PICSI 4.0e-39
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 2.10195e-43
C-terminus
sp_v3.0_unigene158340 SustainPine v3.0 362
• AutoFact: Proteasome subunit beta type n=4 Tax=Andropogoneae RepID=C5WNX2_SORBI 4.0e-26
• FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome chain protein 1.072e-08
N-terminus
sp_v3.0_unigene158442 SustainPine v3.0 403
• AutoFact: Proteasome subunit alpha type n=1 Tax=Ectocarpus siliculosus RepID=D7G614_ECTSI 0.0
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 2.271e-35
N-terminus
sp_v3.0_unigene158501 SustainPine v3.0 371
• AutoFact: Proteasome subunit alpha type n=1 Tax=Ectocarpus siliculosus RepID=D8LID9_ECTSI 7.0e-34
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 4.826e-20
Putative C-terminus
sp_v3.0_unigene158606 SustainPine v3.0 407
• AutoFact: ubitquitin C-terminal hydrolase [Chlamydomonas reinhardtii] 6.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene158649 SustainPine v3.0 382
• AutoFact: Proteasome subunit beta type 6 n=1 Tax=Dictyostelium fasciculatum RepID=F4Q3J1_9MYCE 8.0e-40
• FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit beta type-6 9.004e-08
N-terminus
sp_v3.0_unigene158689 SustainPine v3.0 405
• AutoFact: Cold shock protein (Beta-ribbon, CspA family) n=1 Tax=Pseudomonas fluorescens WH6 RepID=E2XMQ1_PSEFL 5.0e-27
• FL-Next: tr=Putative glycine-rich protein; Picea glauca (White spruce) (Pinus glauca). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain