Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ubiquitin-dependent protein catabolic process

Term: GO:0006511  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene156714 SustainPine v3.0 429
• AutoFact: Proteasome subunit alpha type n=2 Tax=Phytophthora infestans RepID=D0MT27_PHYIT 6.0e-31
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 1.01e-27
C-terminus
sp_v3.0_unigene156758 SustainPine v3.0 481
• AutoFact: Proteasome subunit alpha type-3 n=5 Tax=core eudicotyledons RepID=PSA3_ARATH 6.99949e-42
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 4.753e-23
C-terminus
sp_v3.0_unigene156868 SustainPine v3.0 436
• AutoFact: 20S proteasome subunit C2 n=1 Tax=Dictyostelium fasciculatum RepID=F4PYC7_9MYCE 7.0e-34
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 3.37e-20
Putative C-terminus
sp_v3.0_unigene156870 SustainPine v3.0 525
• AutoFact: Proteasome subunit alpha type n=1 Tax=Selaginella moellendorffii RepID=D8T290_SELML 0.0
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 0.0
N-terminus
sp_v3.0_unigene156951 SustainPine v3.0 380
• AutoFact: Proteasome subunit beta type n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9BXI6_9EUKA 1.0e-32
• FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 20S proteasome subunit beta-6 5.891e-09
C-terminus
sp_v3.0_unigene156970 SustainPine v3.0 369
• AutoFact: Proteasome subunit alpha type 5 n=1 Tax=Naegleria gruberi RepID=D2UXR2_NAEGR 1.0e-32
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 3.921e-18
C-terminus
sp_v3.0_unigene156979 SustainPine v3.0 539
• AutoFact: Proteasome subunit alpha type n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CGK9_9EUKA 1.4013e-45
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 1.775e-25
C-terminus
sp_v3.0_unigene157009 SustainPine v3.0 503
• AutoFact: SCF ubiquitin ligase complex protein SKP1a n=3 Tax=Dictyostelium RepID=SKP1A_DICDI 7.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fimbriata-associated protein 8.379e-24
N-terminus
sp_v3.0_unigene157045 SustainPine v3.0 299
• AutoFact: Proteasome subunit beta type n=1 Tax=Naegleria gruberi RepID=D2UXF6_NAEGR 1.0e-28
• FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit beta type-6 8.406e-08
N-terminus
sp_v3.0_unigene157073 SustainPine v3.0 361
• AutoFact: SKP1 component [Medicago truncatula] 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene157082 SustainPine v3.0 260
• AutoFact: Skp1 n=1 Tax=Physarum polycephalum RepID=Q95UI9_PHYPO 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fimbriata-associated protein 8.438e-23
C-terminus
sp_v3.0_unigene157137 SustainPine v3.0 380
• AutoFact: Enolase n=1 Tax=Naegleria gruberi RepID=D2V522_NAEGR 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Enolase 0.0
C-terminus
sp_v3.0_unigene157153 SustainPine v3.0 215
• AutoFact: pentatricopeptide, putative [Oryza sativa Japonica Group] 4.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative 4.095e-08
Internal
sp_v3.0_unigene157168 SustainPine v3.0 427
• AutoFact: Cullin n=1 Tax=Chlamydomonas reinhardtii RepID=A8JHY5_CHLRE 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cullin 4.19e-15
Complete
sp_v3.0_unigene157189 SustainPine v3.0 255
• AutoFact: Ubiquitin carrier protein n=1 Tax=Toxoplasma gondii RepID=B9PV70_TOXGO 3.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 0.0
N-terminus
sp_v3.0_unigene157268 SustainPine v3.0 349
• AutoFact: Proteasome subunit alpha type n=1 Tax=Naegleria gruberi RepID=D2V9D2_NAEGR 4.99997e-41
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 0.0
Internal
sp_v3.0_unigene157342 SustainPine v3.0 417
• AutoFact: Proteasome subunit beta type n=1 Tax=Naegleria gruberi RepID=D2VJ06_NAEGR 2.0e-30
• FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit beta type-1 3.593e-12
N-terminus
sp_v3.0_unigene157398 SustainPine v3.0 501
• AutoFact: S-phase kinase-associated protein 1 n=34 Tax=Euteleostomi RepID=SKP1_MOUSE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fimbriata-associated protein 9.677e-24
N-terminus
sp_v3.0_unigene157435 SustainPine v3.0 308
• AutoFact: Proteasome subunit alpha type n=1 Tax=Ectocarpus siliculosus RepID=D8LT05_ECTSI 8.0e-25
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 7.306e-36
N-terminus
sp_v3.0_unigene157629 SustainPine v3.0 144
• AutoFact: 20S proteasome subunit n=1 Tax=Melampsora larici-populina 98AG31 RepID=F4R7Z4_9BASI 3.0e-13
• FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain