Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ubiquitin-dependent protein catabolic process

Term: GO:0006511  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene149451 SustainPine v3.0 183
• AutoFact: ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis thaliana] gb|ABK28304.1| unknown [Arabidopsis thaliana] gb|AEE81971.1| ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis thaliana] 9.0e-21
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene149810 SustainPine v3.0 328
• AutoFact: Ankyrin; Pentatricopeptide repeat [Medicago truncatula] 6.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 5.235e-14
Internal
sp_v3.0_unigene149949 SustainPine v3.0 221
• AutoFact: Os02g0151000 protein n=3 Tax=Oryza sativa RepID=Q67UW7_ORYSJ 8.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: EMB2261 putative 6.002e-07
N-terminus
sp_v3.0_unigene150028 SustainPine v3.0 335
• AutoFact: DUF659 domain containing protein 1.0e-34
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene150107 SustainPine v3.0 385
• AutoFact: probable Nedd4 family E3 ubiquitin ligase [Candida albicans SC5314] ref|XP_714470.1| probable Nedd4 family E3 ubiquitin ligase [Candida albicans SC5314] gb|EAK95408.1| probable Nedd4 family E3 ubiquitin ligase [Candida albicans SC5314] gb|EAK95463.1| prob 7.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: E3 ubiquitin protein ligase upl2, putative 5.523e-09
C-terminus
sp_v3.0_unigene150117 SustainPine v3.0 326
• AutoFact: Proteasome subunit alpha 3 (T01 family) n=1 Tax=Schistosoma mansoni RepID=C1M0C4_SCHMA 2.0e-16
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 9.8e-18
C-terminus
sp_v3.0_unigene150135 SustainPine v3.0 411
• AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Nematostella vectensis RepID=A7RVV5_NEMVE 8.00001e-41
• FL-Next: sp=Putative ubiquitin carboxyl-terminal hydrolase 11; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Ubiquitin carboxyl-terminal hydrolase 9.447e-27
Internal
sp_v3.0_unigene150157 SustainPine v3.0 316
• AutoFact: elongation factor SIII p15 subunit, putative [Aedes aegypti] gb|EAT43917.1| elongation factor SIII p15 subunit, putative [Aedes aegypti] 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Volvox carteri (Green alga). 0.0
• Sma3: Elongin C 2.113e-13
Putative Complete
sp_v3.0_unigene150230 SustainPine v3.0 385
• AutoFact: PREDICTED: similar to HECT, UBA and WWE domain containing 1 n=1 Tax=Hydra magnipapillata RepID=UPI000192598E 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: E3 ubiquitin protein ligase upl2, putative 1.208e-08
Internal
sp_v3.0_unigene150238 SustainPine v3.0 166
• AutoFact: Proteasome subunit beta type n=1 Tax=Malassezia globosa CBS 7966 RepID=A8Q3I4_MALGO 4.0e-20
• FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit beta type 5 1.842e-08
Internal
sp_v3.0_unigene150246 SustainPine v3.0 258
• AutoFact: proteasome subunit beta type-2-A [Arabidopsis thaliana] sp|O23714.1|PSB2A_ARATH RecName: Full=Proteasome subunit beta type-2-A; AltName: Full=20S proteasome beta subunit D-1; AltName: Full=Proteasome component GB; AltName: Full=Proteasome subunit beta typ 1.0e-21
• FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit beta type-4 3.753e-08
Internal
sp_v3.0_unigene150315 SustainPine v3.0 165
• AutoFact: Fimbriata-associated protein (Fragment) n=1 Tax=Antirrhinum majus RepID=O48570_ANTMA 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fimbriata-associated protein 2.958e-12
Internal
sp_v3.0_unigene150356 SustainPine v3.0 445
• AutoFact: Alpha 2 subunit of 20S proteasome (ISS) n=2 Tax=Ostreococcus RepID=Q017X9_OSTTA 0.0
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 2.247e-10
C-terminus
sp_v3.0_unigene150800 SustainPine v3.0 383
• AutoFact: WD40-like domain-containing protein n=1 Tax=Dictyostelium discoideum RepID=Q55DD5_DICDI 4.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene150871 SustainPine v3.0 326
• AutoFact: Ubiquitin carrier protein n=1 Tax=Toxoplasma gondii RepID=Q1JSN8_TOXGO 4.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 0.0
Putative C-terminus
sp_v3.0_unigene150909 SustainPine v3.0 215
• AutoFact: Proteasome subunit alpha type n=1 Tax=Triatoma matogrossensis RepID=E2J7E5_9HEMI 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 2.325e-10
Internal
sp_v3.0_unigene150929 SustainPine v3.0 372
• AutoFact: SCF ubiquitin ligase complex protein SKP1a n=3 Tax=Dictyostelium RepID=SKP1A_DICDI 3.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fimbriata-associated protein 1.076e-23
Internal
sp_v3.0_unigene150931 SustainPine v3.0 223
• AutoFact: ubiquitin conjugating enzyme E2, putative [Aedes aegypti] gb|EAT39708.1| ubiquitin conjugating enzyme E2, putative [Aedes aegypti] 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene151122 SustainPine v3.0 446
• AutoFact: Thioredoxin n=1 Tax=Daphnia pulex RepID=E9GC11_DAPPU 1.0e-27
• FL-Next: sp=Thioredoxin H-type 1; Nicotiana tabacum (Common tobacco). 0.0
• Sma3: Thioredoxin H-type 1.532e-15
Complete
sp_v3.0_unigene151133 SustainPine v3.0 397
• AutoFact: Ubiquitin carrier protein n=2 Tax=Bacillariophyta RepID=B7G7K7_PHATC 3.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain