Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cell wall macromolecule catabolic process

Term: GO:0016998  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene485 SustainPine v3.0 4814
AutoFact: [S] COG1652 Uncharacterized protein containing LysM domain 5.0e-05
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative Complete
sp_v3.0_unigene487 SustainPine v3.0 1192
AutoFact: putative chitinase [Musa acuminata] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chitinase 0.0
Complete
sp_v3.0_unigene918 SustainPine v3.0 2175
AutoFact: peptidoglycan-binding LysM domain-containing protein [Arabidopsis thaliana] gb|AAM98176.1| unknown protein [Arabidopsis thaliana] gb|AAP37868.1| At5g08200 [Arabidopsis thaliana] gb|AED91270.1| peptidoglycan-binding LysM domain-containing protein [Arabidop 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative Complete
sp_v3.0_unigene938 SustainPine v3.0 1064
AutoFact: Barwin multi-domain protein 0.0
FL-Next: tr=PR-4 protein; Pseudotsuga menziesii (Douglas-fir) (Abies menziesii). 0.0
Sma3: Pathogenesis-related protein 4b 1.113e-10
Complete
sp_v3.0_unigene1307 SustainPine v3.0 2466
AutoFact: WAK-like kinase n=1 Tax=Solanum lycopersicum RepID=Q6QLL5_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Wall-associated kinase, putative 2.63e-18
Complete
sp_v3.0_unigene1386 SustainPine v3.0 1659
AutoFact: LysM domain-containing GPI-anchored protein 1 [Arabidopsis thaliana] sp|Q93ZH0.1|LYM1_ARATH RecName: Full=LysM domain-containing GPI-anchored protein 1; Flags: Precursor gb|AAL09782.1| At1g21880/T26F17_5 [Arabidopsis thaliana] gb|AAU90072.1| At1g21880 [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Erwinia induced protein 1 8.957e-17
Complete
sp_v3.0_unigene1820 SustainPine v3.0 838
AutoFact: Drf_FH1 multi-domain protein 6.0e-18
coding
sp_v3.0_unigene1902 SustainPine v3.0 2178
AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9STB5_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene2336 SustainPine v3.0 587
AutoFact: FAP multi-domain protein 2.0e-15
Sma3: Anther-specific proline rich protein 1.837e-06
coding
sp_v3.0_unigene3321 SustainPine v3.0 605
AutoFact: FAP multi-domain protein 5.0e-20
Sma3: Glycine-rich protein 5.632e-13
coding
sp_v3.0_unigene3850 SustainPine v3.0 612
AutoFact: class II chitinase [Picea abies] 0.0
FL-Next: tr=Pschi4; Pinus strobus (Eastern white pine). 0.0
Sma3: Chitinase 0.0
C-terminus
sp_v3.0_unigene4500 SustainPine v3.0 1041
AutoFact: Class IV chitinase Chia4-Pa1.3 n=8 Tax=Picea RepID=Q6WSS1_PICAB 0.0
FL-Next: tr=Class I chitinase; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
Sma3: Class IV chitinase A 0.0
Complete
sp_v3.0_unigene4552 SustainPine v3.0 386
AutoFact: putative receptor protein kinase [Oryza sativa Japonica Group] 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene4717 SustainPine v3.0 502
AutoFact: lysin motif receptor-like kinase [Arabidopsis thaliana] gb|AAC17086.1| putative protein kinase [Arabidopsis thaliana] gb|AEC07489.1| lysin motif receptor-like kinase [Arabidopsis thaliana] 4.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene4806 SustainPine v3.0 530
AutoFact: RecName: Full=Wound-induced protein WIN1; Flags: Precursor emb|CAA31851.1| WIN1 protein [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene4906 SustainPine v3.0 372
AutoFact: Class IV chitinase Chia4-Pa1.3 n=8 Tax=Picea RepID=Q6WSS1_PICAB 0.0
FL-Next: tr=Class IV chitinase 4-6; Pseudotsuga menziesii (Douglas-fir) (Abies menziesii). 0.0
Sma3: Class IV chitinase 1.345e-31
C-terminus
sp_v3.0_unigene4990 SustainPine v3.0 472
AutoFact: Class IV chitinase Chia4-Pa1.3 n=8 Tax=Picea RepID=Q6WSS1_PICAB 9.80909e-45
FL-Next: tr=Class IV chitinase Chia4-Pa1.3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Chromosome chr5 scaffold_72, whole genome shotgun sequence 3.483e-22
Putative N-terminus
sp_v3.0_unigene5854 SustainPine v3.0 2440
AutoFact: LysM type receptor kinase-like protein [Arabidopsis thaliana] gb|AEE32737.1| LysM type receptor kinase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Receptor serine-threonine protein kinase, putative 1.319e-19
Complete
sp_v3.0_unigene5862 SustainPine v3.0 1238
AutoFact: pfam01476, LysM, LysM domain 9.0e-09
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene5957 SustainPine v3.0 2486
AutoFact: [M] COG5498 Predicted glycosyl hydrolase 6.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta-glucan binding protein 3.622e-09
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain