Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cell wall macromolecule catabolic process

Term: GO:0016998  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene183425 SustainPine v3.0 566
AutoFact: 40S ribosomal protein S3 n=1 Tax=Xenopsylla cheopis RepID=A2IA98_9NEOP 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative 40S ribosomal protein 3.131e-07
N-terminus
sp_v3.0_unigene184711 SustainPine v3.0 683
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: At5g62150 5.848e-06
Complete
sp_v3.0_unigene189278 SustainPine v3.0 341
AutoFact: class IV chitinase [Galega orientalis] 1.0e-07
FL-Next: tr=Class VII chitinase; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
C-terminus
sp_v3.0_unigene189910 SustainPine v3.0 285
AutoFact: Unassigned protein 4.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene190719 SustainPine v3.0 237
AutoFact: LysM domain GPI-anchored protein 1, putative n=1 Tax=Ricinus communis RepID=B9RJ77_RICCO 3.0e-13
FL-Next: Isoform 2 of LysM domain-containing GPI-anchored protein 1 OS=Arabidopsis thaliana GN=At1g21880 0.0
Internal
sp_v3.0_unigene199880 SustainPine v3.0 363
AutoFact: Probable fumarate hydratase, mitochondrial n=4 Tax=Caenorhabditis RepID=FUMH_CAEEL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fumarate hydratase 8.619e-12
Internal
sp_v3.0_unigene203121 SustainPine v3.0 306
AutoFact: Class II chitinase 2-3 n=1 Tax=Pseudotsuga menziesii RepID=D7P706_PSEMZ 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Class IV chitinase 3.189e-07
N-terminus
sp_v3.0_unigene203447 SustainPine v3.0 265
AutoFact: Class II chitinase 2-3 n=1 Tax=Pseudotsuga menziesii RepID=D7P706_PSEMZ 3.0e-18
FL-Next: tr=Class VII chitinase; Picea engelmannii x Picea glauca. 0.0
N-terminus
sp_v3.0_unigene205626 SustainPine v3.0 233
AutoFact: Extensin_2 multi-domain protein 8.0e-25
Sma3: Extensin 0.0
coding
sp_v3.0_unigene206762 SustainPine v3.0 347
AutoFact: Class IV chitinase Chia4-Pa1.3 n=8 Tax=Picea RepID=Q6WSS1_PICAB 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Class IV chitinase 4.939e-22
C-terminus
sp_v3.0_unigene209308 SustainPine v3.0 535
AutoFact: FAP multi-domain protein 7.0e-19
Sma3: Glycine-rich protein 1.108e-14
coding
sp_v3.0_unigene209716 SustainPine v3.0 489
AutoFact: FAP multi-domain protein 6.0e-19
Sma3: Glycine-rich protein 4.818e-12
coding
sp_v3.0_unigene209837 SustainPine v3.0 335
AutoFact: Class II chitinase 2-3 n=1 Tax=Pseudotsuga menziesii RepID=D7P706_PSEMZ 7.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr5 scaffold_72, whole genome shotgun sequence 3.498e-23
N-terminus
sp_v3.0_unigene210324 SustainPine v3.0 487
AutoFact: Class IV chitinase n=1 Tax=Cryptomeria japonica RepID=Q5NTA4_CRYJA 0.0
FL-Next: tr=Chitinase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Class IV chitinase 2.354e-16
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain