Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: transcription regulator activity

Term: GO:0030528  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene31193 SustainPine v3.0 518
• AutoFact: DNA-directed RNA polymerase subunit n=2 Tax=Papilionoideae RepID=Q2HU21_MEDTR 7.0e-06
• FL-Next: sp=DNA-directed RNA polymerase subunit; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
• Sma3: DNA-directed RNA polymerase, subunit C11/M/9 8.285e-06
C-terminus
sp_v3.0_unigene31738 SustainPine v3.0 637
• AutoFact: ribosomal protein L7 [Branchiostoma lanceolatum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7 4.775e-11
Putative N-terminus
sp_v3.0_unigene31969 SustainPine v3.0 487
• AutoFact: Chain e, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome pdb|3IZR|EE Chain e, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Tr 3.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7 3.732e-11
C-terminus
sp_v3.0_unigene33100 SustainPine v3.0 926
• AutoFact: Helix-loop-helix DNA-binding n=1 Tax=Medicago truncatula RepID=Q2HTT3_MEDTR 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene33299 SustainPine v3.0 798
• AutoFact: HLH domain containing protein 6.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene33854 SustainPine v3.0 751
• AutoFact: Unassigned protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene33903 SustainPine v3.0 436
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene33919 SustainPine v3.0 899
• AutoFact: Helix-loop-helix DNA-binding n=1 Tax=Medicago truncatula RepID=Q2HTT3_MEDTR 1.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene34237 SustainPine v3.0 2013
• AutoFact: basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group] dbj|BAD19276.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group] 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: BHLH transcription factor 1.276e-20
Putative Complete
sp_v3.0_unigene34385 SustainPine v3.0 1231
• AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SFI8_PHYPA 6.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription factor S-II family protein, expressed 8.772e-06
Complete
sp_v3.0_unigene34515 SustainPine v3.0 542
• AutoFact: BAH and TFIIS domain-containing protein [Arabidopsis thaliana] emb|CAB41133.1| putative protein [Arabidopsis thaliana] gb|AEE78362.1| BAH and TFIIS domain-containing protein [Arabidopsis thaliana] 4.0e-28
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene35407 SustainPine v3.0 930
• AutoFact: Calmodulin-binding protein n=2 Tax=Solanum lycopersicum RepID=E5D5L1_SOLLC 6.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Anther ethylene-upregulated protein ER1, putative, expressed 1.328e-08
Complete
sp_v3.0_unigene35478 SustainPine v3.0 1025
• AutoFact: cwf21 domain containing protein 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene35915 SustainPine v3.0 1917
• AutoFact: NAC protein n=2 Tax=Oryza sativa RepID=Q8H045_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
N-terminus
sp_v3.0_unigene36305 SustainPine v3.0 1182
• AutoFact: ribosomal protein L7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene36779 SustainPine v3.0 252
• AutoFact: Unassigned protein 4.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene37089 SustainPine v3.0 1301
• AutoFact: Ribosomal protein L30 n=3 Tax=Medicago truncatula RepID=Q2HVI3_MEDTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene37248 SustainPine v3.0 1234
• AutoFact: MIP-T3 multi-domain protein 6.0e-16
coding
sp_v3.0_unigene37261 SustainPine v3.0 800
• AutoFact: transcription factor bHLH112 [Arabidopsis thaliana] sp|Q94JL3.1|BH112_ARATH RecName: Full=Transcription factor bHLH112; AltName: Full=Basic helix-loop-helix protein 112; Short=AtbHLH112; Short=bHLH 112; AltName: Full=Transcription factor EN 64; AltName: F 3.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription factor, putative 1.352e-09
C-terminus
sp_v3.0_unigene37769 SustainPine v3.0 913
• AutoFact: NAC protein n=2 Tax=Oryza sativa RepID=Q8H045_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain