Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: transcription regulator activity

Term: GO:0030528  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene26690 SustainPine v3.0 1037
• AutoFact: Activating signal cointegrator, putative n=1 Tax=Ricinus communis RepID=B9R996_RICCO 0.0
• FL-Next: tr=Activating signal cointegrator, putative; Ricinus communis (Castor bean). 0.0
C-terminus
sp_v3.0_unigene26737 SustainPine v3.0 215
• AutoFact: DNA-directed RNA polymerase subunit n=7 Tax=Embryophyta RepID=Q2QNM4_ORYSJ 2.0e-27
• FL-Next: sp=DNA-directed RNA polymerase subunit; Vitis vinifera (Grape). 0.0
• Sma3: DNA-directed RNA polymerase II 14.5 kDa polypeptide 4.89e-08
Internal
sp_v3.0_unigene26938 SustainPine v3.0 479
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene27555 SustainPine v3.0 825
• AutoFact: ribosomal protein L7 [Crassostrea gigas] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7, putative 4.629e-11
Complete
sp_v3.0_unigene27748 SustainPine v3.0 1794
• AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Picea sitchensis RepID=D5AAK0_PICSI 0.0
• FL-Next: sp=DNA-directed RNA polymerase subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA-directed RNA polymerase subunit 1.984e-12
Complete
sp_v3.0_unigene28047 SustainPine v3.0 849
• AutoFact: CCT domain containing protein 1.0e-20
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Sma3: Zinc finger protein CONSTANS-LIKE 16 3.659e-08
Complete
sp_v3.0_unigene28087 SustainPine v3.0 746
• AutoFact: Unassigned protein 4.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene28339 SustainPine v3.0 958
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_89.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7SMT7_VITVI 0.0
• FL-Next: sp=Reticuline oxidase-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Reticuline oxidase, putative 3.063e-30
Putative C-terminus
sp_v3.0_unigene28658 SustainPine v3.0 2149
• AutoFact: pfam00010, HLH, Helix-loop-helix DNA-binding domain 2.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: At4g36060-like protein 3.211e-07
Complete
sp_v3.0_unigene28807 SustainPine v3.0 293
• AutoFact: MYB transcription factor MYB185 [Glycine max] 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MYB transcription factor 7.961e-09
Internal
sp_v3.0_unigene29393 SustainPine v3.0 535
• AutoFact: transcription factor bHLH95 [Arabidopsis thaliana] sp|Q9FXA3.2|BH095_ARATH RecName: Full=Transcription factor bHLH95; AltName: Full=Basic helix-loop-helix protein 95; Short=AtbHLH95; Short=bHLH 95; AltName: Full=Protein RETARDED GROWTH OF EMBRYO 1; AltNam 0.0001
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene29526 SustainPine v3.0 776
• AutoFact: Transcription factor ICE1, putative n=1 Tax=Ricinus communis RepID=B9RA76_RICCO 8.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene29791 SustainPine v3.0 882
• AutoFact: basic helix-loop-helix domain-containing protein [Arabidopsis thaliana] ref|XP_002893369.1| hypothetical protein ARALYDRAFT_472704 [Arabidopsis lyrata subsp. lyrata] dbj|BAC43682.1| unknown protein [Arabidopsis thaliana] gb|AAO42932.1| At1g26948 [Arabidop 1.0e-23
• FL-Next: sp=Transcription factor bHLH135; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Transcription regulator, putative 9.213e-11
Complete
sp_v3.0_unigene29834 SustainPine v3.0 947
• AutoFact: serine/arginine repetitive matrix 2, isoform CRA_e [Homo sapiens] 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene29862 SustainPine v3.0 1019
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene29977 SustainPine v3.0 4095
• AutoFact: Calmodulin-binding transcription activator 3 [Arabidopsis thaliana] 0.0
• FL-Next: sp=Calmodulin-binding transcription activator 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Calmodulin-binding transcription activator (Camta), plants, putative 2.43e-15
Complete
sp_v3.0_unigene29985 SustainPine v3.0 2518
• AutoFact: BHLH transcription factor PTF1-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q6EPZ6_ORYSJ 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: BHLH transcription factor GBOF-1 6.026e-10
Complete
sp_v3.0_unigene30191 SustainPine v3.0 849
• AutoFact: NAC domain protein, IPR003441 n=1 Tax=Populus trichocarpa RepID=B9MU01_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
N-terminus
sp_v3.0_unigene30703 SustainPine v3.0 1159
• AutoFact: pfam00010, HLH, Helix-loop-helix DNA-binding domain 2.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene30934 SustainPine v3.0 2027
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ER33 protein 5.567e-15
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain