Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: transcription regulator activity

Term: GO:0030528  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene156201 SustainPine v3.0 534
• AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Phytophthora infestans T30-4 RepID=D0NTV1_PHYIT 9.0e-31
• FL-Next: sp=DNA-directed RNA polymerase subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene156277 SustainPine v3.0 257
• AutoFact: Ribosomal protein L7 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9BWB7_9EUKA 7.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene156563 SustainPine v3.0 349
• AutoFact: Ribosomal protein L7e n=1 Tax=Agriotes lineatus RepID=Q4GXM4_AGRLI 8.99999e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7 1.012e-07
C-terminus
sp_v3.0_unigene156946 SustainPine v3.0 337
• AutoFact: S60 ribosomal protein L7 n=1 Tax=Polysphondylium pallidum RepID=D3BVG5_POLPA 9.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7-2 8.406e-08
C-terminus
sp_v3.0_unigene157663 SustainPine v3.0 359
• AutoFact: Gag-protease-integrase-RT-RNaseH polyprotein n=1 Tax=Glycine max RepID=B5U9F7_SOYBN 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.433e-30
Internal
sp_v3.0_unigene157705 SustainPine v3.0 392
• AutoFact: Ribosomal protein L7 (Fragment) n=1 Tax=Petromyzon marinus RepID=Q801I3_PETMA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7 4.624e-11
Internal
sp_v3.0_unigene158600 SustainPine v3.0 469
• AutoFact: PREDICTED: ribosomal protein L7-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBAA67 2.94273e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7-2 6.476e-08
C-terminus
sp_v3.0_unigene158790 SustainPine v3.0 281
• AutoFact: CCR4-NOT transcription complex subunit 3 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9C6J8_9EUKA 2.0e-29
• FL-Next: sp=Probable NOT transcription complex subunit VIP2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Not1 N-terminal domain, CCR4-Not complex component family protein, expressed 2.304e-09
C-terminus
sp_v3.0_unigene159382 SustainPine v3.0 170
• AutoFact: putative elongation factor (ISS) [Ostreococcus tauri] emb|CAL56002.1| putative elongation factor (ISS) [Ostreococcus tauri] 6.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene160213 SustainPine v3.0 488
• AutoFact: Hexokinase 1 n=1 Tax=Eriobotrya japonica RepID=F2YQ38_9ROSA 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Hexokinase 5.553e-36
Internal
sp_v3.0_unigene160625 SustainPine v3.0 363
• AutoFact: MYB transcription factor MYB92 [Glycine max] 1.0e-23
• FL-Next: tr=Myb-like protein; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: MYB transcription factor 1.702e-15
Complete
sp_v3.0_unigene161497 SustainPine v3.0 247
• AutoFact: Gag-protease-integrase-RT-RNaseH polyprotein n=1 Tax=Glycine max RepID=B5U9F7_SOYBN 2.0e-35
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Transposon protein, putative, unclassified 7.069e-08
Internal
sp_v3.0_unigene161828 SustainPine v3.0 265
• AutoFact: pfam00010, HLH, Helix-loop-helix DNA-binding domain 9.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene161849 SustainPine v3.0 319
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9R6W2_RICCO 6.0e-27
• FL-Next: Isoform 2 of Pre-mRNA-processing protein 40A OS=Arabidopsis thaliana GN=PRP40A 0.0
• Sma3: Protein binding protein, putative 8.948e-06
Internal
sp_v3.0_unigene162196 SustainPine v3.0 393
• AutoFact: ribosomal protein L7 isoform B [Lysiphlebus testaceipes] 5.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene162319 SustainPine v3.0 180
• AutoFact: Transcription factor bHLH87 n=2 Tax=Arabidopsis RepID=BH087_ARATH 2.0e-08
• FL-Next: sp=Transcription factor bHLH87; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene162443 SustainPine v3.0 386
• AutoFact: Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] dbj|BAB09690.1| unnamed protein product [Arabidopsis thaliana] gb|AED90833.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] 1.0e-19
• FL-Next: sp=Probable mediator of RNA polymerase II transcription subunit 26b; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene162478 SustainPine v3.0 467
• AutoFact: Putative basic helix-loop-helix protein BHLH10 n=1 Tax=Lotus japonicus RepID=C0JP15_LOTJA 9.0e-11
• FL-Next: sp=Transcription factor bHLH84; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene163249 SustainPine v3.0 364
• AutoFact: basic helix-loop-helix (bHLH) family protein 9.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: BHLH transcription factor 1.049e-09
Internal
sp_v3.0_unigene164401 SustainPine v3.0 177
• AutoFact: NAC secondary wall thickening promoting factor 1 n=1 Tax=Medicago truncatula RepID=D8WJD8_MEDTR 8.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain