Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: transcription regulator activity

Term: GO:0030528  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene98620 SustainPine v3.0 301
AutoFact: Putative bHLH transcription factor PTF1 n=2 Tax=Oryza sativa RepID=Q6Z7E7_ORYSJ 2.0e-06
FL-Next: sp=Transcription factor bHLH69; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Os02g0564700 protein 5.361e-06
Internal
sp_v3.0_unigene99279 SustainPine v3.0 655
AutoFact: similar to MYC transcription factor; K13422 transcription factor MYC2 5.0e-22
FL-Next: tr=JAMYC; Taxus cuspidata (Japanese yew). 0.0
Internal
sp_v3.0_unigene99373 SustainPine v3.0 456
AutoFact: CCR4-NOT transcription complex subunit, putative n=1 Tax=Ricinus communis RepID=B9SW63_RICCO 2.0e-16
FL-Next: sp=Probable NOT transcription complex subunit VIP2; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene99388 SustainPine v3.0 402
AutoFact: Ethylene-insensitive 3-like 1 protein n=1 Tax=Citrus sinensis RepID=D7PVG7_CITSI 0.0
FL-Next: sp=Protein ETHYLENE INSENSITIVE 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ethylene signal transcription factor 1.902e-15
Internal
sp_v3.0_unigene99942 SustainPine v3.0 659
AutoFact: Transcription factor SCREAM2 n=2 Tax=Arabidopsis RepID=SCRM2_ARATH 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Inducer of CBF expression 1 4.796e-12
C-terminus
sp_v3.0_unigene100092 SustainPine v3.0 305
AutoFact: Unassigned protein 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene100231 SustainPine v3.0 902
AutoFact: Med26 domain containing protein 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene100290 SustainPine v3.0 396
AutoFact: NAC domain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SVG2_RICCO 3.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 1.485e-36
N-terminus
sp_v3.0_unigene100876 SustainPine v3.0 448
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene101594 SustainPine v3.0 593
AutoFact: PRP38_assoc multi-domain protein 3.0e-08
coding
sp_v3.0_unigene101616 SustainPine v3.0 399
AutoFact: basic helix-loop-helix domain-containing protein [Arabidopsis thaliana] ref|XP_002893369.1| hypothetical protein ARALYDRAFT_472704 [Arabidopsis lyrata subsp. lyrata] dbj|BAC43682.1| unknown protein [Arabidopsis thaliana] gb|AAO42932.1| At1g26948 [Arabidop 4.0e-17
FL-Next: sp=Transcription factor bHLH135; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Transcription regulator, putative 3.728e-11
N-terminus
sp_v3.0_unigene101695 SustainPine v3.0 492
AutoFact: Unassigned protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene102445 SustainPine v3.0 603
AutoFact: Unassigned protein 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene102446 SustainPine v3.0 315
AutoFact: transcription factor bHLH76 [Arabidopsis thaliana] gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana] emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana] gb|AEE30669.1| transcription factor bHLH76 [Arabidopsis thaliana] 4.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: BHLH transcription factor 1.574e-19
Internal
sp_v3.0_unigene102855 SustainPine v3.0 735
AutoFact: APO protein 3 [Arabidopsis thaliana] ref|NP_001119475.1| APO protein 3 [Arabidopsis thaliana] sp|Q9FH50.1|APO3_ARATH RecName: Full=APO protein 3, mitochondrial; Flags: Precursor dbj|BAB08879.1| unnamed protein product [Arabidopsis thaliana] gb|AED97538.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: APO protein 3, mitochondrial, putative 4.296e-09
C-terminus
sp_v3.0_unigene103519 SustainPine v3.0 444
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_33.assembly12x (Fragment) n=2 Tax=rosids RepID=D7U403_VITVI 5.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene103560 SustainPine v3.0 461
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RWI9_RICCO 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA binding protein, putative 4.52e-14
Internal
sp_v3.0_unigene103571 SustainPine v3.0 223
AutoFact: BHLH domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZIP2_MALDO 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene104006 SustainPine v3.0 703
AutoFact: pfam00010, HLH, Helix-loop-helix DNA-binding domain 7.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene104862 SustainPine v3.0 489
AutoFact: Unassigned protein
FL-Next: sp=Transcription factor LHW; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain