Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: protein complex

Term: GO:0043234  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene159135 SustainPine v3.0 332
• AutoFact: Alpha-tubulin n=1 Tax=Hymenolepis diminuta RepID=Q8T672_HYMDI 1.0e-36
• FL-Next: tr=Alpha tubulin 1; Pseudotsuga menziesii var. menziesii. 0.0
• Sma3: Alpha-tubulin 5.181e-33
N-terminus
sp_v3.0_unigene159251 SustainPine v3.0 181
• AutoFact: alpha-tubulin [Trichodina nobilis] gb|ABQ65174.1| alpha-tubulin [Trichodina heterodentata] 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 1.132e-13
Internal
sp_v3.0_unigene159263 SustainPine v3.0 367
• AutoFact: 26S proteasome-associated pad1 homolog variant (Fragment) n=7 Tax=Tetrapoda RepID=Q59G89_HUMAN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 26S proteasome regulatory subunit 5.771e-07
Putative C-terminus
sp_v3.0_unigene159314 SustainPine v3.0 349
• AutoFact: PREDICTED: similar to tubulin, alpha 2 isoform 2 [Strongylocentrotus purpuratus] ref|XP_001177431.1| PREDICTED: similar to tubulin, alpha 2 isoform 2 [Strongylocentrotus purpuratus] 5.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 3.777e-12
C-terminus
sp_v3.0_unigene159315 SustainPine v3.0 303
• AutoFact: 26S proteasome non-ATPase regulatory subunit 14 n=27 Tax=Chordata RepID=PSDE_HUMAN 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 26S proteasome regulatory subunit 3.191e-10
N-terminus
sp_v3.0_unigene160322 SustainPine v3.0 416
• AutoFact: Receptor-like protein kinase (Fragment) n=1 Tax=Prunus dulcis RepID=Q9LLT5_PRUDU 9.00054e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative leucine-rich repeat receptor-like kinase 1.59e-23
Internal
sp_v3.0_unigene161836 SustainPine v3.0 130
• AutoFact: Tubulin gamma chain n=2 Tax=Micromonas RepID=C1EBX4_MICSR 1.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Gamma tubulin 6.267e-20
Internal
sp_v3.0_unigene161880 SustainPine v3.0 375
• AutoFact: Similarity to 26S proteasome subunit 4 n=2 Tax=Arabidopsis thaliana RepID=Q9LIM2_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Bromodomain protein 2.082e-08
Internal
sp_v3.0_unigene162277 SustainPine v3.0 315
• AutoFact: proteasome activator subunit 4-like [Oryza sativa Japonica Group] 6.0e-17
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene162764 SustainPine v3.0 123
• AutoFact: Alpha-tubulin (Fragment) n=1 Tax=Oxyrrhis marina RepID=D2YYD2_OXYMA 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 1.446e-20
Putative C-terminus
sp_v3.0_unigene162786 SustainPine v3.0 387
• AutoFact: proteasome maturation protein [Arabidopsis thaliana] gb|AAK73254.1| Unknown protein [Arabidopsis thaliana] gb|AAM63832.1| unknown [Arabidopsis thaliana] dbj|BAC41881.1| unknown protein [Arabidopsis thaliana] gb|AAO39907.1| At1g67250 [Arabidopsis thaliana] 2.0e-16
• FL-Next: tr=Putative uncharacterized protein Sb08; Picea mariana (Black spruce) (Abies mariana). 0.0
Putative Complete
sp_v3.0_unigene163665 SustainPine v3.0 328
• AutoFact: GTP binding protein [Arabidopsis thaliana] sp|Q6F6B5.2|ARC3_ARATH RecName: Full=Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3; Flags: Precursor gb|AEE35661.1| GTP binding protein [Arabidopsis thaliana] 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene165790 SustainPine v3.0 387
• AutoFact: protein kinase-like protein [Arabidopsis thaliana] sp|Q5XF57.1|Y5576_ARATH RecName: Full=Probable receptor-like serine/threonine-protein kinase At5g57670 gb|AAU90049.1| At5g57670 [Arabidopsis thaliana] gb|AAW30041.1| At5g57670 [Arabidopsis thaliana] gb|AE 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene166635 SustainPine v3.0 373
• AutoFact: probably inactive leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] sp|Q9ASS4.1|Y5838_ARATH RecName: Full=Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380; Flags: Precursor gb|AAK32899.1|AF367312_1 AT5g483 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 9.897e-14
Internal
sp_v3.0_unigene166903 SustainPine v3.0 199
• AutoFact: 26S proteasome regulatory subunit N1 [Arabidopsis thaliana] sp|Q9SIV2.2|RPN1A_ARATH RecName: Full=26S proteasome non-ATPase regulatory subunit 2 1A; AltName: Full=26S proteasome regulatory subunit RPN1 A; Short=AtRPN1a; AltName: Full=26S proteasome regula 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative 26S proteasome regulatory subunit S2 1.243e-12
Internal
sp_v3.0_unigene167455 SustainPine v3.0 287
• AutoFact: 26S proteasome regulatory subunit 8 n=3 Tax=Spermatophyta RepID=Q9M613_PINTA 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasomal ATPase 1.615e-14
Internal
sp_v3.0_unigene183155 SustainPine v3.0 544
• AutoFact: 26S proteasome regulatory subunit N1 [Arabidopsis thaliana] sp|Q9SIV2.2|RPN1A_ARATH RecName: Full=26S proteasome non-ATPase regulatory subunit 2 1A; AltName: Full=26S proteasome regulatory subunit RPN1 A; Short=AtRPN1a; AltName: Full=26S proteasome regula 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative 26S proteasome regulatory subunit S2 1.968e-12
Internal
sp_v3.0_unigene183944 SustainPine v3.0 474
• AutoFact: DSS1_SEM1 multi-domain protein 2.0e-23
putative_coding
sp_v3.0_unigene184544 SustainPine v3.0 558
• AutoFact: 26S protease regulatory subunit 8 n=7 Tax=Eukaryota RepID=F4W633_9HYME 0.0
• FL-Next: tr=26S proteasome regulatory subunit 8; Pinus taeda (Loblolly pine). 0.0
• Sma3: Proteasomal ATPase 2.993e-14
C-terminus
sp_v3.0_unigene187618 SustainPine v3.0 494
• AutoFact: MORN domain containing protein 3.0e-06
• FL-Next: sp=Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain