Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: protein complex

Term: GO:0043234  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene146199 SustainPine v3.0 519
• AutoFact: Tubulin alpha-6 chain n=85 Tax=Eukaryota RepID=TBA6_ARATH 0.0
• FL-Next: tr=Alpha tubulin 1; Pseudotsuga menziesii var. menziesii. 0.0
• Sma3: Alpha-tubulin 1.113e-21
Internal
sp_v3.0_unigene146249 SustainPine v3.0 736
• AutoFact: PREDICTED: similar to Tubulin alpha-3/alpha-7 chain (Alpha-tubulin 3/7) (Alpha-tubulin isotype M-alpha-3/7) n=1 Tax=Pan troglodytes RepID=UPI0000E23559 0.0
• FL-Next: tr=Alpha tubulin 1; Pseudotsuga menziesii var. menziesii. 0.0
• Sma3: Alpha-tubulin 7.347e-31
Putative N-terminus
sp_v3.0_unigene146265 SustainPine v3.0 783
• AutoFact: Alpha-tubulin-like protein n=1 Tax=Solanum tuberosum RepID=Q3HRW7_SOLTU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 2.123e-10
N-terminus
sp_v3.0_unigene146331 SustainPine v3.0 911
• AutoFact: Tubulin alpha-2/alpha-4 chain n=384 Tax=Eukaryota RepID=TBA2_ARATH 4.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 4.391e-17
Putative Complete
sp_v3.0_unigene146428 SustainPine v3.0 1199
• AutoFact: alpha tubulin 1 [Pseudotsuga menziesii var. menziesii] gb|AAV92353.1| alpha tubulin 1 [Pseudotsuga menziesii var. menziesii] gb|AAV92354.1| alpha tubulin 1 [Pseudotsuga menziesii var. menziesii] gb|AAV92355.1| alpha tubulin 1 [Pseudotsuga menziesii var. m 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 4.506e-31
Putative Complete
sp_v3.0_unigene146463 SustainPine v3.0 386
• AutoFact: PREDICTED: similar to tubulin, alpha 1 n=1 Tax=Canis lupus familiaris RepID=UPI00005A03AE 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 1.109e-28
Internal
sp_v3.0_unigene146506 SustainPine v3.0 607
• AutoFact: Tubulin alpha-6 chain n=85 Tax=Eukaryota RepID=TBA6_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 1.736e-24
Internal
sp_v3.0_unigene146509 SustainPine v3.0 462
• AutoFact: Alpha-tubulin (Fragment) n=1 Tax=Camellia sinensis RepID=Q646H4_CAMSI 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tubulin alpha-2 chain 1.544e-09
Putative Complete
sp_v3.0_unigene146538 SustainPine v3.0 652
• AutoFact: PREDICTED: LOW QUALITY PROTEIN: tubulin alpha-1C chain-like n=1 Tax=Macaca mulatta RepID=UPI0001D53D82 8.96831e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 6.249e-24
Putative N-terminus
sp_v3.0_unigene146542 SustainPine v3.0 534
• AutoFact: alpha-tubulin 3 [Populus tremuloides] 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 1.621e-28
N-terminus
sp_v3.0_unigene146568 SustainPine v3.0 488
• AutoFact: Alpha-tubulin (Fragment) n=5 Tax=core eudicotyledons RepID=Q9SQ74_GOSHI 3.00004e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 3.033e-16
Putative Complete
sp_v3.0_unigene146602 SustainPine v3.0 551
• AutoFact: Tubulin alpha 3 chain (Fragment) n=5 Tax=Magnoliophyta RepID=A6MZF8_ORYSI 4.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 1.086e-13
Putative Complete
sp_v3.0_unigene148402 SustainPine v3.0 405
• AutoFact: Serine/threonine-protein kinase PBS1, putative n=1 Tax=Ricinus communis RepID=B9S062_RICCO 7.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Receptor protein kinase-like 1.641e-10
Internal
sp_v3.0_unigene148427 SustainPine v3.0 143
• AutoFact: Tubulin gamma-1 chain n=30 Tax=Embryophyta RepID=TBG1_ARATH 2.0e-11
• FL-Next: sp=Tubulin gamma chain; Anemia phyllitidis (Fern) (Osmunda phyllitidis). 0.0
• Sma3: Tubulin gamma chain 2.835e-12
N-terminus
sp_v3.0_unigene148526 SustainPine v3.0 238
• AutoFact: putative rubisco activase [Oryza sativa Japonica Group] 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Rubisco activase 1.233e-27
Internal
sp_v3.0_unigene149300 SustainPine v3.0 372
• AutoFact: 26S protease regulatory subunit 6B homolog n=13 Tax=Embryophyta RepID=PRS6B_ARATH 5.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative 26S proteasome AAA-ATPase subunit RPT6a 5.415e-08
Internal
sp_v3.0_unigene150101 SustainPine v3.0 216
• AutoFact: Tubulin alpha-1 chain n=5 Tax=Coelomata RepID=F4WDI4_9HYME 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 3.735e-12
Putative C-terminus
sp_v3.0_unigene150122 SustainPine v3.0 448
• AutoFact: 26S proteasome regulatory subunit S2 n=1 Tax=Polysphondylium pallidum RepID=D3B684_POLPA 9.80909e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative 26S proteasome regulatory subunit S2 1.691e-12
Putative C-terminus
sp_v3.0_unigene150142 SustainPine v3.0 438
• AutoFact: Alpha tubulin (Fragment) n=1 Tax=Acanthamoeba polyphaga RepID=Q102R7_ACAPO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 2.808e-20
Internal
sp_v3.0_unigene150446 SustainPine v3.0 435
• AutoFact: Tubulin beta-5 chain n=14 Tax=Eukaryota RepID=TBB5_ECTVR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-tubulin 3.38e-12
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain