Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: protein complex

Term: GO:0043234  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene145290 SustainPine v3.0 844
• AutoFact: Tubulin alpha-2/alpha-4 chain n=384 Tax=Eukaryota RepID=TBA2_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 7.864e-29
Putative Complete
sp_v3.0_unigene145426 SustainPine v3.0 879
• AutoFact: PREDICTED: tubulin alpha-8 chain-like n=1 Tax=Meleagris gallopavo RepID=UPI0002034995 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tubulin alpha-2 chain 1.231e-09
Complete
sp_v3.0_unigene145621 SustainPine v3.0 636
• AutoFact: PREDICTED: tubulin alpha-8 chain-like n=1 Tax=Meleagris gallopavo RepID=UPI0002034995 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 1.537e-18
Putative C-terminus
sp_v3.0_unigene145700 SustainPine v3.0 1053
• AutoFact: Tubulin alpha-2 chain n=20 Tax=Magnoliophyta RepID=TBA2_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 4.297e-31
N-terminus
sp_v3.0_unigene145701 SustainPine v3.0 667
• AutoFact: Tubulin beta 4 chain (Fragment) n=14 Tax=Magnoliophyta RepID=Q6LAB6_ARATH 3.99931e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tubulin beta chain 6.605e-12
Putative C-terminus
sp_v3.0_unigene145709 SustainPine v3.0 491
• AutoFact: Beta tubulin (Fragment) n=1 Tax=Rhodomonas salina RepID=C0SKA0_RHDSA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta tubulin 1.999e-08
Internal
sp_v3.0_unigene145736 SustainPine v3.0 647
• AutoFact: Tubulin beta chain, putative n=2 Tax=Eukaryota RepID=B9S382_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: TBB1_VOLCA Tubulin beta chain (ISS) 2.455e-08
Internal
sp_v3.0_unigene145739 SustainPine v3.0 634
• AutoFact: Tubulin beta chain, putative n=1 Tax=Ricinus communis RepID=B9SB77_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta tubulin like protein 2.424e-08
Internal
sp_v3.0_unigene145785 SustainPine v3.0 564
• AutoFact: Tubulin alpha-6 chain n=85 Tax=Eukaryota RepID=TBA6_ARATH 0.0
• FL-Next: tr=Alpha tubulin 1; Pseudotsuga menziesii var. menziesii. 0.0
• Sma3: Alpha-tubulin 1.17e-17
Internal
sp_v3.0_unigene145789 SustainPine v3.0 723
• AutoFact: beta tubulin 3 [Hordeum vulgare subsp. vulgare] dbj|BAK06418.1| predicted protein [Hordeum vulgare subsp. vulgare] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta tubulin like protein 2.47e-08
N-terminus
sp_v3.0_unigene145867 SustainPine v3.0 877
• AutoFact: PREDICTED: LOW QUALITY PROTEIN: tubulin alpha-3C/D chain-like n=1 Tax=Pongo abelii RepID=UPI0001D601A7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 7.897e-20
Internal
sp_v3.0_unigene145886 SustainPine v3.0 377
• AutoFact: Tubulin beta-1 chain n=7 Tax=Eukaryota RepID=TBB1_SOYBN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-tubulin 2.593e-14
Internal
sp_v3.0_unigene145944 SustainPine v3.0 513
• AutoFact: Tubulin beta chain, putative n=1 Tax=Ricinus communis RepID=B9SB77_RICCO 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tubulin beta-1 chain 5.256e-09
C-terminus
sp_v3.0_unigene145999 SustainPine v3.0 956
• AutoFact: Beta tubulin (Fragment) n=1 Tax=Rhodomonas salina RepID=C0SKA0_RHDSA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta tubulin 6.63e-14
Putative Complete
sp_v3.0_unigene146028 SustainPine v3.0 969
• AutoFact: Tubulin alpha-6 chain n=85 Tax=Eukaryota RepID=TBA6_ARATH 0.0
• FL-Next: tr=Alpha tubulin 1; Pseudotsuga menziesii var. menziesii. 0.0
• Sma3: Alpha tubulin 1.2e-26
Putative C-terminus
sp_v3.0_unigene146083 SustainPine v3.0 781
• AutoFact: alpha tubulin 1 [Pseudotsuga menziesii var. menziesii] gb|AAV92353.1| alpha tubulin 1 [Pseudotsuga menziesii var. menziesii] gb|AAV92354.1| alpha tubulin 1 [Pseudotsuga menziesii var. menziesii] gb|AAV92355.1| alpha tubulin 1 [Pseudotsuga menziesii var. m 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 1.235e-23
C-terminus
sp_v3.0_unigene146086 SustainPine v3.0 982
• AutoFact: Tubulin alpha subunit n=11 Tax=Eukaryota RepID=B1NHW5_9EUKA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 3.286e-14
Misassembled
sp_v3.0_unigene146143 SustainPine v3.0 728
• AutoFact: PREDICTED: similar to Tubulin alpha-3/alpha-7 chain (Alpha-tubulin 3/7) (Alpha-tubulin isotype M-alpha-3/7) n=1 Tax=Pan troglodytes RepID=UPI0000E23559 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 4.555e-10
Putative Complete
sp_v3.0_unigene146176 SustainPine v3.0 318
• AutoFact: Tubulin alpha 3 chain (Fragment) n=5 Tax=Magnoliophyta RepID=A6MZF8_ORYSI 8.99999e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 2.449e-18
Internal
sp_v3.0_unigene146192 SustainPine v3.0 800
• AutoFact: Tubulin alpha-2/alpha-4 chain n=384 Tax=Eukaryota RepID=TBA2_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 5.21e-23
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain