Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: protein complex

Term: GO:0043234  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene127173 SustainPine v3.0 530
• AutoFact: Probable 26S proteasome regulatory subunit (Fragment) n=11 Tax=Spermatophyta RepID=Q30HZ5_9CONI 8.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Probable 26S proteasome regulatory subunit 0.0
C-terminus
sp_v3.0_unigene127222 SustainPine v3.0 1725
• AutoFact: 26S proteasome regulatory subunit N2 [Arabidopsis thaliana] gb|AAF40455.1|AC004809_13 Strong similarity to the SEN3-like tRNA-processing protein F24L7.13 from A. thaliana gi|2914700 on BAC gb|AC003974. EST gb|AA712969 comes from this gene [Arabidopsis tha 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 26S proteasome regulatory subunit 3.069e-09
C-terminus
sp_v3.0_unigene127447 SustainPine v3.0 1317
• AutoFact: Tubulin alpha-2/alpha-4 chain n=384 Tax=Eukaryota RepID=TBA2_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 7.18e-31
Putative Complete
sp_v3.0_unigene127530 SustainPine v3.0 1333
• AutoFact: Tubulin alpha-1 chain (Fragment) n=3 Tax=Magnoliophyta RepID=A6MZU0_ORYSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 1.282e-14
Putative Complete
sp_v3.0_unigene127692 SustainPine v3.0 482
• AutoFact: Phytosulfokine receptor, putative n=1 Tax=Ricinus communis RepID=B9SQH2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative leucine-rich repeat receptor-like kinase 7.318e-23
Internal
sp_v3.0_unigene127837 SustainPine v3.0 1369
• AutoFact: PREDICTED: LOW QUALITY PROTEIN: tubulin alpha-3C/D chain-like n=1 Tax=Pongo abelii RepID=UPI0001D601A7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 2.167e-13
Putative Complete
sp_v3.0_unigene127907 SustainPine v3.0 620
• AutoFact: 26S protease regulatory subunit 6a, putative n=2 Tax=Magnoliophyta RepID=B9RFB5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 26S proteasome regulatory subunit 4.719e-06
N-terminus
sp_v3.0_unigene129238 SustainPine v3.0 419
• AutoFact: Alpha-tubulin (Fragment) n=1 Tax=Camellia sinensis RepID=Q646H4_CAMSI 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 6.35e-10
C-terminus
sp_v3.0_unigene129700 SustainPine v3.0 172
unknown
sp_v3.0_unigene130300 SustainPine v3.0 340
• AutoFact: Peroxisome biogenesis protein 1 n=2 Tax=Arabidopsis RepID=PEX1_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cell division cycle protein 48 2.33e-13
Internal
sp_v3.0_unigene131210 SustainPine v3.0 307
• AutoFact: 26S proteasome subunit RPN7 [Capsicum annuum] 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 26S proteasome subunit RPN7 1.147e-09
Internal
sp_v3.0_unigene131823 SustainPine v3.0 351
• AutoFact: putative partner of Nob1 [Oryza sativa Japonica Group] dbj|BAB90119.1| putative partner of Nob1 [Oryza sativa Japonica Group] gb|EEE55513.1| hypothetical protein OsJ_03725 [Oryza sativa Japonica Group] 7.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Partner of Nob1 1.355e-08
C-terminus
sp_v3.0_unigene131985 SustainPine v3.0 278
• AutoFact: 26S proteasome non-ATPase regulatory subunit 14 n=21 Tax=Embryophyta RepID=PSDE_ARATH 9.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 26S proteasome regulatory subunit 7.483e-07
Internal
sp_v3.0_unigene132024 SustainPine v3.0 234
• AutoFact: Probable 26S proteasome regulatory subunit (Fragment) n=11 Tax=Spermatophyta RepID=Q30HZ5_9CONI 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 26S proteasome subunit RPN7 2.953e-09
Internal
sp_v3.0_unigene132505 SustainPine v3.0 278
• AutoFact: putative receptor protein kinase PERK1 [Oryza sativa Japonica Group] 7.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP binding protein, putative 4.64e-08
Internal
sp_v3.0_unigene132897 SustainPine v3.0 248
• AutoFact: Beta-tubulin (Fragment) n=1 Tax=Spinacia oleracea RepID=A3FMG7_SPIOL 7.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene133173 SustainPine v3.0 679
• AutoFact: Tubulin alpha subunit n=11 Tax=Eukaryota RepID=B1NHW5_9EUKA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tubulin alpha-2 chain 1.525e-09
Putative Complete
sp_v3.0_unigene133854 SustainPine v3.0 362
• AutoFact: 26S proteasome non-ATPase regulatory subunit 14 n=21 Tax=Embryophyta RepID=PSDE_ARATH 9.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 26S proteasome regulatory subunit 3.787e-10
Internal
sp_v3.0_unigene135437 SustainPine v3.0 222
• AutoFact: 26S proteasome regulatory subunit N5 n=1 Tax=Arabidopsis thaliana RepID=B3H6B0_ARATH 1.0e-11
• FL-Next: tr=26S proteasome p55 protein-like; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: 26S proteasome subunit RPN5b 1.354e-09
Misassembled
sp_v3.0_unigene136002 SustainPine v3.0 285
• AutoFact: RecName: Full=Proteasome subunit beta type-5; AltName: Full=20S proteasome subunit E; AltName: Full=Proteasome epsilon chain; Flags: Precursor dbj|BAA21650.1| 26S proteasome beta subunit [Spinacia oleracea] 4.0e-37
• FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit beta type 5 1.895e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain