Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: protein complex

Term: GO:0043234  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene65717 SustainPine v3.0 268
• AutoFact: Probable 26S proteasome regulatory subunit (Fragment) n=11 Tax=Spermatophyta RepID=Q30HZ5_9CONI 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Probable 26S proteasome regulatory subunit 0.0
Internal
sp_v3.0_unigene65806 SustainPine v3.0 185
• AutoFact: beta-tubulin [Eucalyptus grandis] 7.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene65817 SustainPine v3.0 204
• AutoFact: rice homologue of Tat binding protein [Oryza sativa Japonica Group] 3.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene65835 SustainPine v3.0 184
• AutoFact: 26S proteasome regulatory subunit 8 n=3 Tax=Spermatophyta RepID=Q9M613_PINTA 1.0e-18
• FL-Next: tr=26S proteasome regulatory subunit 8; Pinus taeda (Loblolly pine). 0.0
• Sma3: Proteasomal ATPase 4.191e-08
Internal
sp_v3.0_unigene65841 SustainPine v3.0 319
• AutoFact: Tubulin beta chain, putative n=1 Tax=Ricinus communis RepID=B9SB77_RICCO 4.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-4-tubulin 4.008e-07
Internal
sp_v3.0_unigene65934 SustainPine v3.0 139
• AutoFact: probable 26S proteasome regulatory subunit [Larix decidua] gb|ABA81910.1| probable 26S proteasome regulatory subunit [Larix kaempferi] gb|ABA81911.1| probable 26S proteasome regulatory subunit [Larix sibirica] gb|ABA81912.1| probable 26S proteasome regula 9.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 26S proteasome subunit RPN7 1.463e-09
Putative C-terminus
sp_v3.0_unigene65963 SustainPine v3.0 133
• AutoFact: 26S protease regulatory subunit 6a, putative n=2 Tax=Magnoliophyta RepID=B9RFB5_RICCO 9.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene67725 SustainPine v3.0 286
• AutoFact: 26S proteasome regulatory subunit N1 [Arabidopsis thaliana] sp|Q9SIV2.2|RPN1A_ARATH RecName: Full=26S proteasome non-ATPase regulatory subunit 2 1A; AltName: Full=26S proteasome regulatory subunit RPN1 A; Short=AtRPN1a; AltName: Full=26S proteasome regula 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative 26S proteasome regulatory subunit S2 2.08e-12
Internal
sp_v3.0_unigene68143 SustainPine v3.0 362
• AutoFact: 26S proteasome regulatory subunit 4 homolog A n=26 Tax=Embryophyta RepID=PRS4A_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 26S proteasome regulatory subunit 6.301e-13
Putative C-terminus
sp_v3.0_unigene68365 SustainPine v3.0 169
• AutoFact: 26S proteasome regulatory subunit n=2 Tax=Chlamydomonadales RepID=A8IV67_CHLRE 7.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene70394 SustainPine v3.0 198
• AutoFact: Tubulin beta chain, putative n=1 Tax=Ricinus communis RepID=B9SB77_RICCO 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta tubulin like protein 3.208e-08
Internal
sp_v3.0_unigene70823 SustainPine v3.0 299
• AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 3.00004e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-tubulin 2.188e-13
N-terminus
sp_v3.0_unigene71888 SustainPine v3.0 146
• AutoFact: AAA+-type ATPase (ISS) [Ostreococcus tauri] emb|CAL52837.1| AAA+-type ATPase (ISS) [Ostreococcus tauri] 1.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 26S proteasome regulatory particle chain RPT6-like protein 3.168e-09
Internal
sp_v3.0_unigene72262 SustainPine v3.0 202
• AutoFact: Immunodeficiency virus Tat binding protein 1 (Fragment) n=1 Tax=Brassica rapa RepID=Q39407_BRACM 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene72268 SustainPine v3.0 311
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SFK8_RICCO 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP binding protein, putative 1.004e-13
Internal
sp_v3.0_unigene72653 SustainPine v3.0 309
• AutoFact: putative receptor-like kinase (with alternative splicing) [Oryza sativa Japonica Group] gb|ABF98430.1| BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed [Oryza sativa Japonica Group] gb|ABF98431.1| BRASSINOSTEROID I 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 2.711e-07
C-terminus
sp_v3.0_unigene72951 SustainPine v3.0 236
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene73177 SustainPine v3.0 210
• AutoFact: putative 26S proteasome regulatory subunit S2 [Arabidopsis thaliana] 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative 26S proteasome regulatory subunit S2 1.691e-12
Internal
sp_v3.0_unigene73337 SustainPine v3.0 258
• AutoFact: 26S proteasome non-ATPase regulatory subunit 2 1A n=4 Tax=Arabidopsis RepID=RPN1A_ARATH 9.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative 26S proteasome regulatory subunit S2 9.483e-13
Internal
sp_v3.0_unigene74486 SustainPine v3.0 392
• AutoFact: FtsZ-like protein [Nicotiana tabacum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Plastid division protein FtsZ 1.413e-27
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain