Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA-directed RNA polymerase activity

Term: GO:0003899  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene42444 SustainPine v3.0 1415
• AutoFact: Phd finger protein, putative n=1 Tax=Ricinus communis RepID=B9SP39_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: SET domain protein 1.141e-12
Putative Complete
sp_v3.0_unigene43958 SustainPine v3.0 487
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max RepID=Q99368_SOYBN 0.0
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA-directed RNA polymerase 9.971e-22
Internal
sp_v3.0_unigene44586 SustainPine v3.0 424
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Pinus nigra RepID=Q2TUP3_9CONI 0.0
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA-directed RNA polymerase 0.0
Internal
sp_v3.0_unigene44642 SustainPine v3.0 312
• AutoFact: Herpes_BLLF1 multi-domain protein 2.0e-07
• Sma3: DNA-directed RNA polymerase 9.64e-20
coding
sp_v3.0_unigene46290 SustainPine v3.0 397
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Ricinus communis RepID=B9SHS2_RICCO 0.0
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA-directed RNA polymerase 7.672e-16
Internal
sp_v3.0_unigene46411 SustainPine v3.0 210
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 9.0e-31
• FL-Next: sp=DNA-directed RNA polymerase subunit beta; Podocarpus totara. Plastid; Chloroplast. 0.0
• Sma3: DNA-directed RNA polymerase 9.572e-33
Internal
sp_v3.0_unigene46806 SustainPine v3.0 165
• AutoFact: DNA-directed RNA polymerase n=3 Tax=Magnoliophyta RepID=B9FZ51_ORYSJ 2.0e-15
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA-directed RNA polymerase 3.813e-08
Internal
sp_v3.0_unigene47850 SustainPine v3.0 2502
• AutoFact: SIN-like protein [Arabidopsis thaliana] dbj|BAB10766.1| unnamed protein product [Arabidopsis thaliana] gb|AED95826.1| SIN-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
C-terminus
sp_v3.0_unigene48105 SustainPine v3.0 236
• AutoFact: RNA polymerase IV largest subunit [Arabidopsis thaliana] 8.0e-14
• FL-Next: sp=DNA-directed RNA polymerase E subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene48468 SustainPine v3.0 565
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA-directed RNA polymerase 7.331e-36
Putative Complete
sp_v3.0_unigene48913 SustainPine v3.0 247
• AutoFact: DNA-directed RNA polymerase n=2 Tax=Selaginella moellendorffii RepID=D8T979_SELML 5.0e-29
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
• Sma3: DNA-directed RNA polymerase 2.716e-13
Internal
sp_v3.0_unigene49057 SustainPine v3.0 137
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Pinus nigra RepID=Q2TUP3_9CONI 3.0e-18
• FL-Next: sp=DNA-directed RNA polymerase; Selaginella moellendorffii (Spikemoss). 0.0
• Sma3: DNA-directed RNA polymerase 4.18e-23
Internal
sp_v3.0_unigene50815 SustainPine v3.0 160
• AutoFact: DNA-directed RNA polymerase n=2 Tax=Oryza sativa Japonica Group RepID=B9F2S6_ORYSJ 2.0e-11
• FL-Next: sp=DNA-directed RNA polymerase E subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: RNA polymerase IV subunit 2.274e-09
Internal
sp_v3.0_unigene52229 SustainPine v3.0 450
• AutoFact: DNA-directed RNA Polymerase II subunit K [Arabidopsis thaliana] dbj|BAB09703.1| unnamed protein product [Arabidopsis thaliana] gb|AAK76628.1| unknown protein [Arabidopsis thaliana] gb|AAL85038.1| unknown protein [Arabidopsis thaliana] gb|AAM67289.1| DNA d 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA-directed RNA polymerases I, II, and III 7.3 kDa polypeptide 3.343e-09
Putative Complete
sp_v3.0_unigene52526 SustainPine v3.0 401
• AutoFact: DUF659 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene54260 SustainPine v3.0 413
• AutoFact: Polyprotein n=1 Tax=Solanum lycopersicum RepID=Q9ZS84_SOLLC 3.00004e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 2.45e-19
Putative Complete
sp_v3.0_unigene54653 SustainPine v3.0 343
• AutoFact: RNA polymerase, dimerisation [Medicago truncatula] 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA-directed RNA polymerase II, third largest subunit 1.764e-08
N-terminus
sp_v3.0_unigene55088 SustainPine v3.0 220
• AutoFact: DNA-directed RNA polymerase (Fragment) n=2 Tax=Vitis vinifera RepID=D7UBN7_VITVI 1.0e-14
• FL-Next: sp=DNA-directed RNA polymerase E subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: RNA polymerase IV subunit 2.438e-09
Internal
sp_v3.0_unigene55939 SustainPine v3.0 186
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Selaginella moellendorffii RepID=D8SDS6_SELML 6.0e-22
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA-directed RNA polymerase 0.0
Internal
sp_v3.0_unigene56217 SustainPine v3.0 482
• AutoFact: Sin_N domain containing protein 9.0e-16
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain