Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA-directed RNA polymerase activity

Term: GO:0003899  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene22796 SustainPine v3.0 1074
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Picea sitchensis RepID=D5AAK0_PICSI 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-directed RNA polymerase subunit 1.984e-12
Complete
sp_v3.0_unigene23292 SustainPine v3.0 489
AutoFact: PREDICTED: DNA directed RNA polymerase II polypeptide D-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBA1E4 5.0e-34
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Complete
sp_v3.0_unigene24355 SustainPine v3.0 426
AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RSV5_PHYPA 1.0e-09
FL-Next: sp=DNA-directed RNA polymerase; Physcomitrella patens subsp. patens (Moss). 0.0
C-terminus
sp_v3.0_unigene24479 SustainPine v3.0 497
AutoFact: DNA-directed RNA polymeraseI n=4 Tax=Culicidae RepID=B0XGQ1_CULQU 1.0e-35
FL-Next: tr=DNAdirected RNA polymerase I putative; Albugo laibachii Nc14. 0.0
Complete
sp_v3.0_unigene24913 SustainPine v3.0 646
Sma3: DNA-directed RNA polymerase 1.046e-11
unknown
sp_v3.0_unigene26198 SustainPine v3.0 303
AutoFact: RecName: Full=DNA-directed RNA polymerase II subunit RPB7; Short=RNA polymerase II subunit B7 gb|AAA34005.1| RNA polymerase II [Glycine max] gb|ACU13766.1| unknown [Glycine max] 4.0e-24
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: RNA polymerase II subunit B7 1.214e-09
N-terminus
sp_v3.0_unigene26528 SustainPine v3.0 566
AutoFact: DNA-directed RNA polymerase n=117 Tax=Hypocreomycetidae RepID=E9ELZ9_METAR 1.0e-14
Sma3: DNA-directed RNA polymerase 3.893e-19
coding
sp_v3.0_unigene26543 SustainPine v3.0 435
AutoFact: DNA-directed RNA polymerase n=1 Tax=Blastocystis hominis RepID=D8LZZ3_BLAHO 5.0e-35
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-directed RNA polymerase 2.855e-11
Internal
sp_v3.0_unigene26737 SustainPine v3.0 215
AutoFact: DNA-directed RNA polymerase subunit n=7 Tax=Embryophyta RepID=Q2QNM4_ORYSJ 2.0e-27
FL-Next: sp=DNA-directed RNA polymerase subunit; Vitis vinifera (Grape). 0.0
Sma3: DNA-directed RNA polymerase II 14.5 kDa polypeptide 4.89e-08
Internal
sp_v3.0_unigene27748 SustainPine v3.0 1794
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Picea sitchensis RepID=D5AAK0_PICSI 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-directed RNA polymerase subunit 1.984e-12
Complete
sp_v3.0_unigene27998 SustainPine v3.0 630
AutoFact: Class III homeodomain leucine zipper protein n=2 Tax=Pinaceae RepID=E7DX27_PICGL 0.0
FL-Next: tr=Class III homeodomain leucine zipper protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Class III homeodomain-leucine zipper protein C3HDZ1 2.765e-33
N-terminus
sp_v3.0_unigene28484 SustainPine v3.0 924
AutoFact: RNA polymerase III RPC4 [Arabidopsis thaliana] emb|CAC05464.1| putative protein [Arabidopsis thaliana] gb|AED91384.1| RNA polymerase III RPC4 [Arabidopsis thaliana] 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene29654 SustainPine v3.0 752
AutoFact: DNA-directed RNA polymerase II 8.2 kDa polypeptide, putative [Musa balbisiana] 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene30160 SustainPine v3.0 765
AutoFact: DNA-directed RNA Polymerase II subunit K [Arabidopsis thaliana] dbj|BAB09703.1| unnamed protein product [Arabidopsis thaliana] gb|AAK76628.1| unknown protein [Arabidopsis thaliana] gb|AAL85038.1| unknown protein [Arabidopsis thaliana] gb|AAM67289.1| DNA d 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene30476 SustainPine v3.0 551
AutoFact: DNA-directed RNA polymerase III subunit C19 [Arabidopsis thaliana] ref|NP_001031443.1| DNA-directed RNA polymerase III subunit C19 [Arabidopsis thaliana] gb|AAC49453.1| RNA polymerase I(A) and III(C) 14 kDa subunit [Arabidopsis thaliana] gb|AAC49454.1| Ar 3.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene31193 SustainPine v3.0 518
AutoFact: DNA-directed RNA polymerase subunit n=2 Tax=Papilionoideae RepID=Q2HU21_MEDTR 7.0e-06
FL-Next: sp=DNA-directed RNA polymerase subunit; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: DNA-directed RNA polymerase, subunit C11/M/9 8.285e-06
C-terminus
sp_v3.0_unigene31304 SustainPine v3.0 335
AutoFact: DNA-directed RNA polymerase II subunit rpb7 n=1 Tax=Dictyostelium discoideum RepID=RPB7_DICDI 1.0e-27
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: RNA polymerase II subunit B7 2.544e-09
C-terminus
sp_v3.0_unigene32166 SustainPine v3.0 547
AutoFact: DNA-directed RNA Polymerase II subunit K [Arabidopsis thaliana] dbj|BAB09703.1| unnamed protein product [Arabidopsis thaliana] gb|AAK76628.1| unknown protein [Arabidopsis thaliana] gb|AAL85038.1| unknown protein [Arabidopsis thaliana] gb|AAM67289.1| DNA d 1.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-directed RNA polymerases I, II, and III 7.3 kDa polypeptide 3.605e-10
Complete
sp_v3.0_unigene32188 SustainPine v3.0 958
AutoFact: DNA-directed RNA polymerase, 14 to 18 kDa subunit [Medicago truncatula] 2.94273e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene32524 SustainPine v3.0 658
AutoFact: DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Homo sapiens] ref|NP_663607.1| DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Mus musculus] ref|NP_001128261.1| polymerase (RNA) II (DNA directed) polypeptide H [Rattus norvegicus] r 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain