Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA-directed RNA polymerase activity

Term: GO:0003899  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene188519 SustainPine v3.0 775
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SFI8_PHYPA 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene189060 SustainPine v3.0 681
AutoFact: RecName: Full=DNA-directed RNA polymerase II subunit RPB7; Short=RNA polymerase II subunit B7 gb|AAA34005.1| RNA polymerase II [Glycine max] gb|ACU13766.1| unknown [Glycine max] 5.0e-07
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
Putative Complete
sp_v3.0_unigene191203 SustainPine v3.0 507
AutoFact: Amelogenin multi-domain protein 9.0e-13
Sma3: DNA-directed RNA polymerase 5.174e-07
coding
sp_v3.0_unigene191357 SustainPine v3.0 346
AutoFact: Collagen multi-domain protein 5.0e-12
Sma3: DNA-directed RNA polymerase 5.889e-14
coding
sp_v3.0_unigene192992 SustainPine v3.0 433
AutoFact: DNA-directed RNA polymerase subunit beta n=1 Tax=Conexibacter woesei DSM 14684 RepID=D3FET2_CONWI 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit beta; Larix decidua (European larch). Plastid; Chloroplast. 0.0
Sma3: DNA-directed RNA polymerase subunit beta 0.0
Internal
sp_v3.0_unigene193150 SustainPine v3.0 607
AutoFact: DNA-directed RNA polymerase n=1 Tax=Trichoplax adhaerens RepID=B3S2W9_TRIAD 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-directed RNA polymerase 0.0
Putative Complete
sp_v3.0_unigene201949 SustainPine v3.0 810
AutoFact: DNA-directed RNA Polymerase II subunit K [Arabidopsis thaliana] dbj|BAB09703.1| unnamed protein product [Arabidopsis thaliana] gb|AAK76628.1| unknown protein [Arabidopsis thaliana] gb|AAL85038.1| unknown protein [Arabidopsis thaliana] gb|AAM67289.1| DNA d 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene206404 SustainPine v3.0 497
AutoFact: DNA-directed RNA polymerase III subunit C19 [Arabidopsis thaliana] ref|NP_001031443.1| DNA-directed RNA polymerase III subunit C19 [Arabidopsis thaliana] gb|AAC49453.1| RNA polymerase I(A) and III(C) 14 kDa subunit [Arabidopsis thaliana] gb|AAC49454.1| Ar 8.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene206664 SustainPine v3.0 362
AutoFact: DNA-directed RNA polymerase II 8.2 kDa polypeptide, putative [Musa balbisiana] 6.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene206892 SustainPine v3.0 547
AutoFact: DNA-directed RNA Polymerase II subunit K [Arabidopsis thaliana] dbj|BAB09703.1| unnamed protein product [Arabidopsis thaliana] gb|AAK76628.1| unknown protein [Arabidopsis thaliana] gb|AAL85038.1| unknown protein [Arabidopsis thaliana] gb|AAM67289.1| DNA d 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-directed RNA polymerases I, II, and III 7.3 kDa polypeptide 6.913e-09
Complete
sp_v3.0_unigene207214 SustainPine v3.0 436
AutoFact: DNA-directed RNA polymerase II 8.2 kDa polypeptide, putative [Musa balbisiana] 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RPB10 6.427e-09
C-terminus
sp_v3.0_unigene207719 SustainPine v3.0 724
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TX75_VITVI 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative C-terminus
sp_v3.0_unigene208653 SustainPine v3.0 291
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene209392 SustainPine v3.0 327
AutoFact: DNA-directed RNA Polymerase II subunit K [Arabidopsis thaliana] dbj|BAB09703.1| unnamed protein product [Arabidopsis thaliana] gb|AAK76628.1| unknown protein [Arabidopsis thaliana] gb|AAL85038.1| unknown protein [Arabidopsis thaliana] gb|AAM67289.1| DNA d 6.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-directed RNA polymerases I, II, and III 7.3 kDa polypeptide 5.58e-09
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain