Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA-directed RNA polymerase activity

Term: GO:0003899  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene153028 SustainPine v3.0 404
• AutoFact: RNA polymerase II core subunit n=1 Tax=Polysphondylium pallidum RepID=D3BKZ5_POLPA 1.0e-29
• FL-Next: sp=DNA-directed RNA polymerase subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA-directed RNA polymerase II 14.5 kDa polypeptide 4.565e-12
Putative Complete
sp_v3.0_unigene153206 SustainPine v3.0 435
• AutoFact: Polymerase n=3 Tax=Chromadorea RepID=E1FRC1_LOALO 9.80909e-45
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: RNA polymerase II subunit B7 1.577e-09
N-terminus
sp_v3.0_unigene153361 SustainPine v3.0 392
• AutoFact: DUF659 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: HAT dimerisation domain-containing protein-like 3.556e-07
Putative N-terminus
sp_v3.0_unigene153956 SustainPine v3.0 434
• AutoFact: DNA-directed RNA polymerase subunit beta n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LJE1_HALO1 0.0
• FL-Next: sp=DNA-directed RNA polymerase subunit beta; Cephalotaxus wilsoniana. Plastid; Chloroplast. 0.0
• Sma3: DNA-directed RNA polymerase subunit beta 0.0
Internal
sp_v3.0_unigene154104 SustainPine v3.0 470
• AutoFact: DNA-directed RNA polymerase II subunit RPB9 n=15 Tax=Diptera RepID=RPB9_DROME 7.0e-26
• FL-Next: sp=DNA-directed RNA polymerase subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: At3g16980 5.361e-06
Complete
sp_v3.0_unigene154287 SustainPine v3.0 436
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Ectocarpus siliculosus RepID=D7G075_ECTSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA-directed RNA polymerase 3.21e-32
Complete
sp_v3.0_unigene154297 SustainPine v3.0 333
• AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RV22_PHYPA 4.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene154754 SustainPine v3.0 436
• AutoFact: PREDICTED: DNA-directed RNA polymerase III B-like n=1 Tax=Rattus norvegicus RepID=UPI0001CF3F5E 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA-directed RNA polymerase 6.549e-30
N-terminus
sp_v3.0_unigene155309 SustainPine v3.0 470
• AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Ixodes scapularis RepID=B7PRG9_IXOSC 0.0
• FL-Next: sp=DNA-directed RNA polymerase subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA-directed RNA polymerase II 14.5 kDa polypeptide 2.847e-12
Complete
sp_v3.0_unigene155384 SustainPine v3.0 247
• AutoFact: DNA-directed RNA polymerase, beta subunit family protein [Tetrahymena thermophila] gb|EAR82894.1| DNA-directed RNA polymerase, beta subunit family protein [Tetrahymena thermophila SB210] 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA-directed RNA polymerase 7.765e-15
Putative N-terminus
sp_v3.0_unigene155770 SustainPine v3.0 483
• AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Phytophthora infestans T30-4 RepID=D0NTV1_PHYIT 3.0e-30
• FL-Next: sp=DNA-directed RNA polymerase subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene155958 SustainPine v3.0 426
• AutoFact: RNA polymerase II core subunit n=1 Tax=Dictyostelium purpureum RepID=F0ZT58_DICPU 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene156163 SustainPine v3.0 422
• AutoFact: RNA polymerase I, II and III 24.3 kDa subunit (ISS) [Ostreococcus tauri] emb|CAL51912.1| RNA polymerase I, II and III 24.3 kDa subunit (ISS) [Ostreococcus tauri] 3.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNA polymerase I, II and III 24.3 kDa subunit 1.186e-08
C-terminus
sp_v3.0_unigene156201 SustainPine v3.0 534
• AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Phytophthora infestans T30-4 RepID=D0NTV1_PHYIT 9.0e-31
• FL-Next: sp=DNA-directed RNA polymerase subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene157504 SustainPine v3.0 252
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Acanthamoeba castellanii RepID=Q0QFR1_ACACA 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA-directed RNA polymerase 1.16e-07
C-terminus
sp_v3.0_unigene157692 SustainPine v3.0 319
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae RepID=C3ZBW5_BRAFL 7.0e-32
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA-directed RNA polymerase 1.956e-07
Internal
sp_v3.0_unigene157978 SustainPine v3.0 349
• AutoFact: Cgd2_980 protein n=4 Tax=Cryptosporidium RepID=F0X4F7_CRYPV 4.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA-directed RNA polymerases II 24 kDa polypeptide 1.042e-08
C-terminus
sp_v3.0_unigene158048 SustainPine v3.0 435
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Thauera sp. MZ1T RepID=C4KC58_THASP 1.4013e-45
• FL-Next: sp=DNA-directed RNA polymerase subunit beta''; Pinus brutia. Plastid; Chloroplast. 0.0
• Sma3: DNA-directed RNA polymerase subunit beta'' 0.0
Putative C-terminus
sp_v3.0_unigene158459 SustainPine v3.0 330
• AutoFact: DNAdirected RNA polymerase I putative n=3 Tax=Albugo laibachii Nc14 RepID=F0W6P2_9STRA 3.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNA polymerase 1.909e-07
N-terminus
sp_v3.0_unigene158954 SustainPine v3.0 237
• AutoFact: DNA-directed RNA polymerase IIa [Nicotiana tabacum] gb|AAD34614.1|AF153278_1 DNA-directed RNA polymerase IIb [Nicotiana tabacum] 7.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative DNA-directed RNA polymerase Iia 1.251e-08
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain