Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA-directed RNA polymerase activity

Term: GO:0003899  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene129484 SustainPine v3.0 449
AutoFact: DUF1421 multi-domain protein 7.0e-09
Sma3: DNA-directed RNA polymerase 4.786e-19
unknown
sp_v3.0_unigene131284 SustainPine v3.0 644
AutoFact: Lectin-like receptor kinase 7;3 n=1 Tax=Medicago truncatula RepID=Q6UY58_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative receptor-type protein kinase LRK1 2.399e-26
Putative C-terminus
sp_v3.0_unigene131755 SustainPine v3.0 187
AutoFact: DNA-directed RNA polymerase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TA90_VITVI 4.0e-15
FL-Next: sp=DNA-directed RNA polymerase 1B, mitochondrial; Nicotiana tabacum (Common tobacco). 0.0
Sma3: DNA-directed RNA polymerase 6.566e-26
Internal
sp_v3.0_unigene133065 SustainPine v3.0 487
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene135441 SustainPine v3.0 199
AutoFact: DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=B6VJT2_VITVI 9.0e-13
FL-Next: sp=DNA-directed RNA polymerase; Phoenix dactylifera (Date palm). Mitochondrion. 0.0
Internal
sp_v3.0_unigene139592 SustainPine v3.0 350
AutoFact: DNA-directed RNA polymerase (Fragment) n=2 Tax=Spermatophyta RepID=E0CQW1_VITVI 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-directed RNA polymerase 0.0
Internal
sp_v3.0_unigene140731 SustainPine v3.0 558
AutoFact: DNA-directed RNA polymerase IIa [Nicotiana tabacum] gb|AAD34614.1|AF153278_1 DNA-directed RNA polymerase IIb [Nicotiana tabacum] 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene141213 SustainPine v3.0 389
AutoFact: DUF659 domain containing protein 3.0e-16
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Chromosome chr9 scaffold_90, whole genome shotgun sequence 4.763e-06
Internal
sp_v3.0_unigene141255 SustainPine v3.0 348
AutoFact: DNA-directed RNA polymerase n=3 Tax=Magnoliophyta RepID=B9FZ51_ORYSJ 2.0e-27
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-directed RNA polymerase 5.553e-12
Internal
sp_v3.0_unigene144890 SustainPine v3.0 424
AutoFact: DNA-directed RNA polymerase subunit n=3 Tax=Andropogoneae RepID=C5YC89_SORBI 1.4013e-45
FL-Next: sp=DNA-directed RNA polymerase subunit; Vitis vinifera (Grape). 0.0
Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene148289 SustainPine v3.0 377
AutoFact: DNA-directed RNA polymerase n=6 Tax=core eudicotyledons RepID=B9SXC0_RICCO 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-directed RNA polymerase 9.526e-27
Internal
sp_v3.0_unigene148862 SustainPine v3.0 568
AutoFact: DNA-directed RNA polymerase n=3 Tax=Tracheophyta RepID=D8SYZ7_SELML 1.0e-26
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene150502 SustainPine v3.0 394
AutoFact: Cuticle_3 multi-domain protein 1.0e-07
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Putative Complete
sp_v3.0_unigene150852 SustainPine v3.0 419
AutoFact: DNA-directed RNA polymerase n=1 Tax=Ectocarpus siliculosus RepID=D7G075_ECTSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-directed RNA polymerase 8.757e-34
Complete
sp_v3.0_unigene151015 SustainPine v3.0 393
AutoFact: DNA-directed RNA polymerase n=1 Tax=Ectocarpus siliculosus RepID=D7G075_ECTSI 1.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-directed RNA polymerase 1.699e-31
Complete
sp_v3.0_unigene151493 SustainPine v3.0 387
AutoFact: DNA-directed RNA polymerase subunit n=2 Tax=Papilionoideae RepID=Q2HU21_MEDTR 2.0e-29
FL-Next: sp=DNA-directed RNA polymerase subunit; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Putative Complete
sp_v3.0_unigene151752 SustainPine v3.0 370
AutoFact: DNA-directed RNA polymerase subunit n=2 Tax=Papilionoideae RepID=Q2HU21_MEDTR 1.0e-23
FL-Next: sp=DNA-directed RNA polymerase subunit; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: DNA-directed RNA polymerase II 14.5 kDa polypeptide 2.847e-12
N-terminus
sp_v3.0_unigene152014 SustainPine v3.0 549
AutoFact: DNAdirected RNA polymerase II 19 kDa polypeptide pu n=2 Tax=Oomycetes RepID=F0WFZ2_9STRA 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: RNA polymerase II subunit B7 1.86e-09
C-terminus
sp_v3.0_unigene152267 SustainPine v3.0 539
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Phytophthora infestans T30-4 RepID=D0NTV1_PHYIT 5.0e-30
FL-Next: sp=DNA-directed RNA polymerase subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene152620 SustainPine v3.0 381
AutoFact: RNA polymerase N/8 kDa subunit n=1 Tax=Dictyostelium fasciculatum RepID=F4PW37_9MYCE 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RPB10 4.959e-09
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain