Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: translational initiation

Term: GO:0006413  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene194 SustainPine v3.0 1781
AutoFact: Translation initiation factor IF-2 (Fragment) n=2 Tax=Vitis vinifera RepID=D7U9V2_VITVI 0.0
FL-Next: sp=Translation initiation factor IF-2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Translation initiation factor IF-2 3.489e-35
Putative C-terminus
sp_v3.0_unigene199 SustainPine v3.0 2299
AutoFact: poly(A)-binding protein [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Poly(A)-binding protein 6.971e-34
Complete
sp_v3.0_unigene1157 SustainPine v3.0 1254
AutoFact: translation initiation factor eIF-5 [Arabidopsis thaliana] sp|Q9S825.1|IF5Z_ARATH RecName: Full=Probable eukaryotic translation initiation factor 5-2; Short=eIF-5 2 gb|AAF17676.1|AC009243_3 F28K19.5 [Arabidopsis thaliana] gb|AAG51628.1|AC012193_10 putativ 3.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene1422 SustainPine v3.0 2739
AutoFact: translation initiation factor 3 subunit B [Arabidopsis thaliana] sp|Q9C5Z1.1|EIF3B_ARATH RecName: Full=Eukaryotic translation initiation factor 3 subunit B; Short=eIF3b; AltName: Full=eIF-3-eta; AltName: Full=eIF3 p110; AltName: Full=p82 gb|AAG53615.1|AF2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene1742 SustainPine v3.0 1219
AutoFact: Translation initiation factor n=4 Tax=Magnoliophyta RepID=B5M1Y2_RHEAU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene1876 SustainPine v3.0 2292
AutoFact: TFIIB-related protein (Fragment) n=1 Tax=Spinacia oleracea RepID=Q93YB0_SPIOL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TFIIB-related protein 2.662e-13
C-terminus
sp_v3.0_unigene2151 SustainPine v3.0 2937
AutoFact: poly(A)-binding protein [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Poly(A)-binding protein 6.971e-34
Complete
sp_v3.0_unigene2177 SustainPine v3.0 1767
AutoFact: transcription factor IIB (ISS) [Ostreococcus tauri] emb|CAL56498.1| transcription factor IIB (ISS) [Ostreococcus tauri] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene3048 SustainPine v3.0 3982
AutoFact: translation initiation factor eIF-3 subunit 10 [Arabidopsis thaliana] sp|Q9LD55.1|EIF3A_ARATH RecName: Full=Eukaryotic translation initiation factor 3 subunit A; Short=eIF3a; AltName: Full=Eukaryotic translation initiation factor 3 large subunit; AltName: 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: eIF3a 9.923e-14
Complete
sp_v3.0_unigene3973 SustainPine v3.0 1599
AutoFact: eukaryotic translation initiation factor 4E [Nicotiana benthamiana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Eukaryotic translation initiation factor 4E 1.485e-22
Complete
sp_v3.0_unigene4839 SustainPine v3.0 727
AutoFact: APO protein 4 [Arabidopsis thaliana] sp|Q9LSZ0.2|APO4_ARATH RecName: Full=APO protein 4, mitochondrial; Flags: Precursor dbj|BAC42155.1| unknown protein [Arabidopsis thaliana] gb|ABF85786.1| At3g21740 [Arabidopsis thaliana] gb|AEE76547.1| APO protein 4 [A 5.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene5697 SustainPine v3.0 2054
AutoFact: Translation initiation factor IF-2 n=1 Tax=Ricinus communis RepID=B9T3K8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Translation initiation factor IF-2 4.281e-34
Complete
sp_v3.0_unigene5792 SustainPine v3.0 3652
AutoFact: putative Eukaryotic translation initiation factor 3 subunit 8 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: eIF3c 7.149e-09
Complete
sp_v3.0_unigene6170 SustainPine v3.0 1326
AutoFact: OB-fold nucleic acid binding domain-containing protein [Arabidopsis thaliana] gb|AEC09877.1| OB-fold nucleic acid binding domain-containing protein [Arabidopsis thaliana] 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene6387 SustainPine v3.0 2774
AutoFact: PREDICTED: similar to Polyadenylate-binding protein 4 (Poly(A)-binding protein 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein-1) (APP-1) isoform 17 [Canis familiaris] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Poly(A)-binding protein 1.314e-22
Complete
sp_v3.0_unigene6965 SustainPine v3.0 1126
AutoFact: Translation initiation factor IF-3 (Fragment) n=1 Tax=Vitis vinifera RepID=D7U1D4_VITVI 4.99983e-42
FL-Next: sp=Translation initiation factor IF-3, chloroplastic; Gracilaria tenuistipitata var. liui (Red alga). Plastid; Chloroplast. 0.0
Sma3: Translation initiation factor IF-3 4.214e-30
Putative Complete
sp_v3.0_unigene7292 SustainPine v3.0 2479
AutoFact: poly(A)-binding protein [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Poly(A)-binding protein 6.848e-34
Complete
sp_v3.0_unigene7965 SustainPine v3.0 2286
AutoFact: translation initiation factor eIF-3 subunit 10 [Arabidopsis thaliana] sp|Q9LD55.1|EIF3A_ARATH RecName: Full=Eukaryotic translation initiation factor 3 subunit A; Short=eIF3a; AltName: Full=Eukaryotic translation initiation factor 3 large subunit; AltName: 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: eIF3a 1.157e-13
Putative Complete
sp_v3.0_unigene8616 SustainPine v3.0 1911
AutoFact: cyclin H-1 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cyclin-H1-1 3.622e-09
Complete
sp_v3.0_unigene9319 SustainPine v3.0 2720
AutoFact: translation initiation factor eIF-3 subunit 10 [Arabidopsis thaliana] sp|Q9LD55.1|EIF3A_ARATH RecName: Full=Eukaryotic translation initiation factor 3 subunit A; Short=eIF3a; AltName: Full=Eukaryotic translation initiation factor 3 large subunit; AltName: 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: eIF3a 1.157e-13
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain