Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: translational initiation

Term: GO:0006413  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene127679 SustainPine v3.0 781
AutoFact: RecName: Full=Transcription initiation factor IIB; AltName: Full=General transcription factor TFIIB gb|AAB09756.1| transcription factor TFIIB [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transcription initiation factor iib, putative 6.241e-12
C-terminus
sp_v3.0_unigene127932 SustainPine v3.0 1147
AutoFact: Transcription initiation factor IIB n=7 Tax=Poaceae RepID=TF2B_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transcription initiation factor iib, putative 1.301e-11
C-terminus
sp_v3.0_unigene128399 SustainPine v3.0 530
AutoFact: Eukaryotic translation initiation factor 2 beta subunit n=1 Tax=Elaeis guineensis RepID=B3TM12_ELAGV 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: eIF-2-beta 3.244e-13
C-terminus
sp_v3.0_unigene129441 SustainPine v3.0 393
AutoFact: Protein translation factor SUI1 homolog n=1 Tax=Salix bakko RepID=SUI1_SALBA 4.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene130664 SustainPine v3.0 658
AutoFact: translation initiation factor eIF-3 subunit 7 [Arabidopsis thaliana] dbj|BAB10117.1| eukaryotic translation initiation factor 3 subunit 7 [Arabidopsis thaliana] gb|AAP40378.1| putative eukaryotic translation initiation factor 3 subunit 7 [Arabidopsis thal 4.0e-18
FL-Next: sp=Eukaryotic translation initiation factor 3 subunit D; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Eukaryotic translation initiation factor 3 subunit 7 7.068e-10
N-terminus
sp_v3.0_unigene133113 SustainPine v3.0 234
unknown
sp_v3.0_unigene136205 SustainPine v3.0 357
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: eIF3a 5.925e-14
Internal
sp_v3.0_unigene139272 SustainPine v3.0 259
unknown
sp_v3.0_unigene140863 SustainPine v3.0 264
AutoFact: Translation initiation factor IF-2 (Fragment) n=2 Tax=Vitis vinifera RepID=D7U9V2_VITVI 3.0e-20
FL-Next: sp=Translation initiation factor IF-2; Vitis vinifera (Grape). 0.0
Sma3: Translation initiation factor IF-2 8.712e-08
C-terminus
sp_v3.0_unigene142008 SustainPine v3.0 359
AutoFact: Probable fibrillarin (Fragment) n=2 Tax=Picea RepID=O65058_PICMA 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fibrillarin, putative 6.336e-08
Putative N-terminus
sp_v3.0_unigene142332 SustainPine v3.0 1111
AutoFact: translation initiation factor 3 subunit B [Arabidopsis thaliana] gb|AED93710.1| translation initiation factor 3 subunit B [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: eIF3b 1.134e-08
Putative C-terminus
sp_v3.0_unigene143172 SustainPine v3.0 825
AutoFact: Eukaryotic translation initiation factor 5A 2 n=3 Tax=Picea RepID=Q3ZDK4_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Eukaryotic translation initiation factor 5A 6.397e-28
Putative Complete
sp_v3.0_unigene143185 SustainPine v3.0 787
AutoFact: eukaryotic translation initiation factor 4E [Lactuca sativa] 3.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene143512 SustainPine v3.0 492
AutoFact: Protein translation factor SUI1 homolog n=22 Tax=Spermatophyta RepID=SUI1_ORYSJ 1.0e-22
FL-Next: sp=Protein translation factor SUI1 homolog; Sporobolus stapfianus (Ressurection grass). 0.0
Sma3: Protein translation factor SUI1 homolog 1.915e-15
C-terminus
sp_v3.0_unigene143589 SustainPine v3.0 261
AutoFact: Eukaryotic translation initiation factor 5 n=4 Tax=Andropogoneae RepID=IF5_MAIZE 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Eukaryotic translation initiation factor 5 1.592e-08
Internal
sp_v3.0_unigene143647 SustainPine v3.0 897
AutoFact: Protein translation factor SUI1 homolog n=1 Tax=Salix bakko RepID=SUI1_SALBA 8.99634e-43
FL-Next: tr=Putative translation factor; Pinus pinaster (Maritime pine). 0.0
Sma3: Protein translation factor SUI1 homolog 8.28e-15
Putative Complete
sp_v3.0_unigene144211 SustainPine v3.0 662
AutoFact: Chain B, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome gb|AAM92710.1| putative 40S ribosomal protein S3 [Triticum aestivum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3 1.218e-10
Complete
sp_v3.0_unigene144226 SustainPine v3.0 733
AutoFact: Eukaryotic translation initiation factor 5A 2 n=3 Tax=Picea RepID=Q3ZDK4_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Eukaryotic translation initiation factor 5A 6.199e-28
Complete
sp_v3.0_unigene144240 SustainPine v3.0 684
AutoFact: putative translation factor [Pinus pinaster] gb|ABK20970.1| unknown [Picea sitchensis] gb|ABK22220.1| unknown [Picea sitchensis] gb|ABK23355.1| unknown [Picea sitchensis] gb|ABK26752.1| unknown [Picea sitchensis] gb|ABR16497.1| unknown [Picea sitchensis] 0.0
FL-Next: tr=Putative translation factor; Pinus pinaster (Maritime pine). 0.0
Sma3: Putative translation factor 0.0
Complete
sp_v3.0_unigene144498 SustainPine v3.0 1641
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein At2g44720 1.696e-09
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain