Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: translational initiation

Term: GO:0006413  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene75797 SustainPine v3.0 409
AutoFact: Eukaryotic translation initiation factor 5A-1 n=47 Tax=Magnoliophyta RepID=IF5A1_MEDSA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Eukaryotic translation initiation factor eIF5A 0.0
Putative N-terminus
sp_v3.0_unigene76059 SustainPine v3.0 136
AutoFact: Eukaryotic translation initiation factor 5A n=3 Tax=Picea RepID=Q3ZDK6_PICAB 6.0e-17
FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Eukaryotic translation initiation factor 5A 4.418e-28
Internal
sp_v3.0_unigene76096 SustainPine v3.0 240
AutoFact: [J] COG5053 Translation initiation factor 4E (eIF-4E) 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene77621 SustainPine v3.0 394
AutoFact: Eukaryotic translation initiation factor 2 beta n=1 Tax=Postia placenta Mad-698-R RepID=B8PIB4_POSPM 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: eIF-2-beta 2.0e-13
Internal
sp_v3.0_unigene80641 SustainPine v3.0 160
AutoFact: Eukaryotic translation initiation factor 1 n=1 Tax=Postia placenta Mad-698-R RepID=B8PG59_POSPM 3.0e-12
FL-Next: tr=Putative translation factor; Pinus pinaster (Maritime pine). 0.0
Sma3: cDNA clone:J023049M22, full insert sequence 9.747e-06
Internal
sp_v3.0_unigene81428 SustainPine v3.0 163
AutoFact: Translation initiation factor IF-2 n=1 Tax=Vitis vinifera RepID=A5B2X2_VITVI 2.0e-09
FL-Next: sp=Translation initiation factor IF-2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Translation initiation factor IF-2 7.536e-15
Internal
sp_v3.0_unigene93842 SustainPine v3.0 610
AutoFact: Os09g0515500 protein n=2 Tax=Oryza sativa RepID=Q69IM0_ORYSJ 0.0
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Translation initiation factor IF-2 4.56e-34
Internal
sp_v3.0_unigene100149 SustainPine v3.0 282
AutoFact: Translation initiation factor IF-2 n=1 Tax=Populus trichocarpa RepID=B9GHX7_POPTR 1.0e-11
FL-Next: sp=Translation initiation factor IF-2, chloroplastic; Phaseolus vulgaris (Kidney bean) (French bean). 0.0
Sma3: Translation initiation factor IF-2 6.932e-18
Internal
sp_v3.0_unigene101199 SustainPine v3.0 269
AutoFact: translation initiation factor eIF-3 subunit P62 [Arabidopsis thaliana] gb|AAC28552.1| expressed protein [Arabidopsis thaliana] gb|AAL38275.1| unknown protein [Arabidopsis thaliana] gb|AAM91144.1| unknown protein [Arabidopsis thaliana] gb|AEC10593.1| trans 2.0e-08
FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
Internal
sp_v3.0_unigene104940 SustainPine v3.0 281
AutoFact: Translation initiation factor IF-2 n=2 Tax=Selaginella moellendorffii RepID=D8RNT4_SELML 7.0e-18
FL-Next: sp=Translation initiation factor IF-2, chloroplastic; Phaseolus vulgaris (Kidney bean) (French bean). 0.0
Sma3: Translation initiation factor IF-2 1.31e-10
Internal
sp_v3.0_unigene105418 SustainPine v3.0 415
AutoFact: APO protein 4 [Arabidopsis thaliana] sp|Q9LSZ0.2|APO4_ARATH RecName: Full=APO protein 4, mitochondrial; Flags: Precursor dbj|BAC42155.1| unknown protein [Arabidopsis thaliana] gb|ABF85786.1| At3g21740 [Arabidopsis thaliana] gb|AEE76547.1| APO protein 4 [A 6.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene105749 SustainPine v3.0 381
AutoFact: Transcription factor IIB n=3 Tax=Solanoideae RepID=B9VXZ5_CAPAN 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Capsicum frutescens (Cayenne pepper) (Tabasco pepper). 0.0
Sma3: TFIIB-related protein 6.635e-09
Internal
sp_v3.0_unigene106683 SustainPine v3.0 289
AutoFact: Os09g0515500 protein n=2 Tax=Oryza sativa RepID=Q69IM0_ORYSJ 2.0e-22
FL-Next: sp=Translation initiation factor IF-2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Translation initiation factor IF-2 2.408e-11
Internal
sp_v3.0_unigene110045 SustainPine v3.0 292
AutoFact: TFIIB-related protein (Fragment) n=2 Tax=Andropogoneae RepID=Q93WQ2_MAIZE 1.0e-36
FL-Next: tr=TFIIB-related protein, putative, expressed; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: TFIIB-related protein 3.176e-13
Putative N-terminus
sp_v3.0_unigene110631 SustainPine v3.0 211
AutoFact: transcription factor IIB (ISS) [Ostreococcus tauri] emb|CAL56498.1| transcription factor IIB (ISS) [Ostreococcus tauri] 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene119699 SustainPine v3.0 310
AutoFact: Unassigned protein
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Putative N-terminus
sp_v3.0_unigene125797 SustainPine v3.0 348
AutoFact: APO protein 2 [Arabidopsis thaliana] gb|AED96973.1| APO protein 2 [Arabidopsis thaliana] 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene126834 SustainPine v3.0 1274
AutoFact: Eukaryotic translation initiation factor 5A 2 n=3 Tax=Picea RepID=Q3ZDK4_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Misassembled
sp_v3.0_unigene126869 SustainPine v3.0 1245
AutoFact: Eukaryotic translation initiation factor 5A 4 n=1 Tax=Picea abies RepID=Q3ZDK5_PICAB 0.0
FL-Next: tr=Eukaryotic translation initiation factor 5A 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Eukaryotic translation initiation factor 5A 7.71e-28
Misassembled
sp_v3.0_unigene127496 SustainPine v3.0 532
AutoFact: Eukaryotic translation initiation factor 5A n=3 Tax=Picea RepID=Q3ZDK6_PICAB 2.0e-27
FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Eukaryotic translation initiation factor 5A 4.053e-27
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain