Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: translation initiation factor activity

Term: GO:0003743  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene37494 SustainPine v3.0 1705
AutoFact: translation initiation factor nCBP [Triticum aestivum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene37521 SustainPine v3.0 2156
AutoFact: translation initiation factor eIF-3 subunit 10 [Arabidopsis thaliana] sp|Q9LD55.1|EIF3A_ARATH RecName: Full=Eukaryotic translation initiation factor 3 subunit A; Short=eIF3a; AltName: Full=Eukaryotic translation initiation factor 3 large subunit; AltName: 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: eIF3a 6.859e-14
Complete
sp_v3.0_unigene37699 SustainPine v3.0 3182
AutoFact: Eukaryotic initiation factor iso4G n=1 Tax=Carica papaya RepID=E3V0I0_CARPA 0.0
FL-Next: sp=Eukaryotic initiation factor iso-4F subunit p82-34; Triticum aestivum (Wheat). 0.0
Sma3: Translation initiation factor eIF(Iso)4G 7.738e-09
Complete
sp_v3.0_unigene37747 SustainPine v3.0 2121
AutoFact: translation initiation factor eIF-2B gamma subunit [Arabidopsis thaliana] gb|ABF59254.1| unknown protein [Arabidopsis thaliana] gb|AED92716.1| translation initiation factor eIF-2B gamma subunit [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene37846 SustainPine v3.0 690
AutoFact: eukaryotic initiation factor 4A [Pennisetum glaucum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 3.985e-09
Internal
sp_v3.0_unigene37872 SustainPine v3.0 1165
AutoFact: RecName: Full=Eukaryotic translation initiation factor 2 subunit beta; Short=eIF-2-beta; AltName: Full=P38 gb|AAB65774.1| eIF-2 beta subunit [Triticum aestivum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene40178 SustainPine v3.0 381
AutoFact: RecName: Full=Transcription initiation factor TFIID subunit 1; AltName: Full=TAFII250 dbj|BAD37451.1| putative HAC13 protein [Oryza sativa Japonica Group] dbj|BAD37604.1| putative HAC13 protein [Oryza sativa Japonica Group] 2.0e-39
FL-Next: sp=Transcription initiation factor TFIID subunit 1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Transcription initiation factor TFIID, subunit TAF1 4.688e-09
Internal
sp_v3.0_unigene41129 SustainPine v3.0 181
AutoFact: Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Picea sitchensis RepID=A9NNT0_PICSI 4.0e-20
FL-Next: sp=Eukaryotic translation initiation factor 3 subunit G; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene41149 SustainPine v3.0 264
AutoFact: DUF1777 multi-domain protein 2.0e-09
coding
sp_v3.0_unigene45776 SustainPine v3.0 682
AutoFact: Transcription Factor IIF, Rap30/Rap74, interaction [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transcription Factor IIF, Rap30/Rap74, interaction 5.379e-09
Internal
sp_v3.0_unigene45810 SustainPine v3.0 490
AutoFact: eukaryotic translation initiation factor 3 (eIF-3), putative [Musa acuminata] 1.0e-17
FL-Next: sp=Eukaryotic translation initiation factor 3 subunit D; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Eukaryotic translation initiation factor 3 subunit 7 3.246e-09
N-terminus
sp_v3.0_unigene48053 SustainPine v3.0 1071
AutoFact: Transcription factor IIIC, subunit 5 [Arabidopsis thaliana] gb|AEE78539.1| Transcription factor IIIC, subunit 5 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Sma3: Chromosome chr5 scaffold_72, whole genome shotgun sequence 3.379e-06
Putative C-terminus
sp_v3.0_unigene48318 SustainPine v3.0 482
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene49059 SustainPine v3.0 234
AutoFact: Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Picea sitchensis RepID=A9NNT0_PICSI 6.0e-35
FL-Next: sp=Eukaryotic translation initiation factor 3 subunit G; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene49614 SustainPine v3.0 718
AutoFact: Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Picea sitchensis RepID=A9NNT0_PICSI 1.4013e-45
FL-Next: sp=Eukaryotic translation initiation factor 3 subunit G; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene49753 SustainPine v3.0 942
AutoFact: Translation initiation factor IF-3 n=1 Tax=Ricinus communis RepID=B9T4Q8_RICCO 0.0
FL-Next: sp=Translation initiation factor IF-3, chloroplastic; Gracilaria tenuistipitata var. liui (Red alga). Plastid; Chloroplast. 0.0
Sma3: Translation initiation factor IF-3 4.214e-30
Putative Complete
sp_v3.0_unigene52985 SustainPine v3.0 365
AutoFact: Translation initiation factor IF6 [Arabidopsis thaliana] sp|Q9M060.1|IF62_ARATH RecName: Full=Eukaryotic translation initiation factor 6-2; Short=AteIF-6;2 emb|CAB81587.1| eukaryotic translation initiation factor 6 (EIF-6)-like protein [Arabidopsis thalia 5.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Eukaryotic translation initiation factor 6 6.985e-08
Putative N-terminus
sp_v3.0_unigene53259 SustainPine v3.0 248
AutoFact: translation initiation factor eIF-3 subunit 10 [Arabidopsis thaliana] sp|Q9LD55.1|EIF3A_ARATH RecName: Full=Eukaryotic translation initiation factor 3 subunit A; Short=eIF3a; AltName: Full=Eukaryotic translation initiation factor 3 large subunit; AltName: 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: eIF3a 6.859e-14
Internal
sp_v3.0_unigene54846 SustainPine v3.0 116
AutoFact: Eukaryotic translation initiation factor 3 subunit C n=3 Tax=Medicago truncatula RepID=EIF3C_MEDTR 9.0e-10
FL-Next: sp=Eukaryotic translation initiation factor 3 subunit C; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: eIF3c 4.823e-09
Internal
sp_v3.0_unigene54962 SustainPine v3.0 426
AutoFact: RecName: Full=Eukaryotic translation initiation factor 3 subunit B; Short=eIF3b; AltName: Full=eIF-3-eta; AltName: Full=eIF3 p110 emb|CAA72721.1| PRT1 protein [Nicotiana tabacum] 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: eIF3b 6.584e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain