Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: translation initiation factor activity

Term: GO:0003743  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene20538 SustainPine v3.0 633
• AutoFact: eukaryotic initiation factor 4A [Pennisetum glaucum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 3.261e-09
Putative N-terminus
sp_v3.0_unigene21118 SustainPine v3.0 724
• AutoFact: Chain B, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome gb|AAM92710.1| putative 40S ribosomal protein S3 [Triticum aestivum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3 1.195e-10
Putative N-terminus
sp_v3.0_unigene21266 SustainPine v3.0 963
• AutoFact: 40S ribosomal protein S3-1 [Arabidopsis thaliana] sp|Q9SIP7.1|RS31_ARATH RecName: Full=40S ribosomal protein S3-1 gb|AAK55690.1|AF378887_1 At2g31610/T9H9.13 [Arabidopsis thaliana] gb|AAD24852.1| 40S ribosomal protein; contains C-terminal domain [Arabidops 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3 1.23e-10
Complete
sp_v3.0_unigene21868 SustainPine v3.0 568
• AutoFact: Eukaryotic translation initiation factor 5A-1 n=3 Tax=Schizosaccharomyces pombe RepID=IF5A1_SCHPO 5.99756e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 5.911e-28
Complete
sp_v3.0_unigene23093 SustainPine v3.0 2439
• AutoFact: Eukaryotic translation initiation factor 4G n=2 Tax=Carica papaya RepID=E3V0H9_CARPA 0.0
• FL-Next: Isoform 2 of Eukaryotic translation initiation factor 4G OS=Arabidopsis thaliana GN=EIF4G 0.0
Internal
sp_v3.0_unigene23239 SustainPine v3.0 930
• AutoFact: eukaryotic translation initiation factor SUI1-like protein [Arabidopsis thaliana] dbj|BAE99137.1| hypothetical protein [Arabidopsis thaliana] gb|AEE35192.1| eukaryotic translation initiation factor SUI1-like protein [Arabidopsis thaliana] 2.0e-39
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
C-terminus
sp_v3.0_unigene24082 SustainPine v3.0 1664
• AutoFact: RecName: Full=Transcription initiation factor IIB; AltName: Full=General transcription factor TFIIB gb|AAB09756.1| transcription factor TFIIB [Glycine max] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription initiation factor iib, putative 1.884e-11
Complete
sp_v3.0_unigene24346 SustainPine v3.0 1724
• AutoFact: Eukaryotic translation initiation factor 4g, putative n=1 Tax=Ricinus communis RepID=B9SKF9_RICCO 0.0
• FL-Next: Isoform 2 of Eukaryotic translation initiation factor 4G OS=Arabidopsis thaliana GN=EIF4G 0.0
Internal
sp_v3.0_unigene24672 SustainPine v3.0 1770
• AutoFact: translation initiation factor 3 subunit K [Arabidopsis thaliana] sp|Q9SZA3.1|EIF3K_ARATH RecName: Full=Eukaryotic translation initiation factor 3 subunit K; Short=eIF3k; AltName: Full=eIF-3 p25 gb|AAG53637.1|AF291713_1 initiation factor 3k [Arabidopsis th 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene26080 SustainPine v3.0 523
• AutoFact: Eukaryotic translation initiation factor 1b n=36 Tax=Euteleostomi RepID=EIF1B_HUMAN 2.0e-39
• FL-Next: tr=Putative translation factor; Pinus pinaster (Maritime pine). 0.0
• Sma3: Protein translation factor SUI1 homolog 6.174e-15
Complete
sp_v3.0_unigene26163 SustainPine v3.0 559
• AutoFact: eIF2B GDP-GTP exchange factor n=1 Tax=Dictyostelium fasciculatum RepID=F4PGT9_9MYCE 1.96182e-44
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
• Sma3: Translation initiation factor 2b, delta subunit, putative 2.399e-09
C-terminus
sp_v3.0_unigene26271 SustainPine v3.0 699
• AutoFact: Translation initiation factor 5A n=1 Tax=Glossina morsitans morsitans RepID=D3TMH0_GLOMM 0.0
• FL-Next: tr=Eukaryotic translation initiation factor 5A 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 5.035e-28
Complete
sp_v3.0_unigene28439 SustainPine v3.0 578
• AutoFact: RecName: Full=Eukaryotic translation initiation factor 3 subunit B; Short=eIF3b; AltName: Full=eIF-3-eta; AltName: Full=eIF3 p110 emb|CAA72721.1| PRT1 protein [Nicotiana tabacum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: eIF3b 7.232e-09
Internal
sp_v3.0_unigene28523 SustainPine v3.0 622
• AutoFact: Translation initiation protein n=2 Tax=Chlamydomonadales RepID=A8IP53_CHLRE 1.0e-24
• FL-Next: tr=Putative translation factor; Pinus pinaster (Maritime pine). 0.0
• Sma3: Protein translation factor SUI1 homolog 2.599e-15
Putative Complete
sp_v3.0_unigene28599 SustainPine v3.0 1631
• AutoFact: Regulator of nonsense transcripts, putative n=1 Tax=Ricinus communis RepID=B9SD55_RICCO 0.0
• FL-Next: tr=Regulator of nonsense transcripts, putative; Ricinus communis (Castor bean). 0.0
N-terminus
sp_v3.0_unigene28647 SustainPine v3.0 972
• AutoFact: transcription initiation factor TFIID subunit 1-A [Arabidopsis thaliana] sp|Q8LRK9.1|TAF1A_ARATH RecName: Full=Transcription initiation factor TFIID subunit 1-A; Short=AtTAF1a; AltName: Full=TAFII250-A gb|AAM34782.1|AF510669_1 HAF1 [Arabidopsis thaliana] 6.02558e-44
• FL-Next: sp=Transcription initiation factor TFIID subunit 1-A; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Transcription initiation factor TFIID, subunit TAF1 4.823e-09
C-terminus
sp_v3.0_unigene29436 SustainPine v3.0 959
• AutoFact: Protein translation factor SUI1 homolog 1 n=12 Tax=core eudicotyledons RepID=SUI11_ARATH 5.60519e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene29452 SustainPine v3.0 1385
• AutoFact: Eukaryotic translation initiation factor 5A 2 n=3 Tax=Picea RepID=Q3ZDK4_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene29652 SustainPine v3.0 862
• AutoFact: Translation initiation factor n=4 Tax=Magnoliophyta RepID=B5M1Y2_RHEAU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene30108 SustainPine v3.0 1010
• AutoFact: Translation initiation factor n=4 Tax=Magnoliophyta RepID=B5M1Y2_RHEAU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain