Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: translation initiation factor activity

Term: GO:0003743  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene144935 SustainPine v3.0 271
• AutoFact: Protein translation factor SUI1 homolog n=22 Tax=Spermatophyta RepID=SUI1_ORYSJ 2.0e-08
• FL-Next: tr=Putative translation factor; Pinus pinaster (Maritime pine). 0.0
• Sma3: Protein translation factor SUI1 homolog 1.445e-15
Putative N-terminus
sp_v3.0_unigene148549 SustainPine v3.0 427
• AutoFact: putative eukaryotic translation initiation factor 6 [Trifolium pratense] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 6 5.099e-24
Internal
sp_v3.0_unigene148577 SustainPine v3.0 399
• AutoFact: Eukaryotic translation initiation factor 5 n=4 Tax=Andropogoneae RepID=IF5_MAIZE 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 5 9.341e-09
Putative N-terminus
sp_v3.0_unigene149755 SustainPine v3.0 174
• AutoFact: ATP-dependent RNA helicase eIF4A n=2 Tax=Ustilaginaceae RepID=IF4A_USTMA 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 2 2.486e-08
Internal
sp_v3.0_unigene149817 SustainPine v3.0 322
• AutoFact: PREDICTED: similar to translation initiation factor eif-2b n=1 Tax=Nasonia vitripennis RepID=UPI00015B5F00 6.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Translation initiation factor fusion with methylthioribose kinase 2.399e-09
Internal
sp_v3.0_unigene150175 SustainPine v3.0 222
• AutoFact: Eukaryotic translation initiation factor eIF-5A n=1 Tax=Aspergillus flavus NRRL3357 RepID=B8N3H7_ASPFN 5.0e-22
• FL-Next: tr=Eukaryotic translation initiation factor 5A 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A-4 1.069e-08
Internal
sp_v3.0_unigene150391 SustainPine v3.0 357
• AutoFact: PREDICTED: similar to Eukaryotic initiation factor 4A-II n=1 Tax=Hydra magnipapillata RepID=UPI0001925CB9 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 1.384e-09
C-terminus
sp_v3.0_unigene150775 SustainPine v3.0 428
• AutoFact: Translation initiation factor IF-2 n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PHH2_CHIPD 3.00018e-42
• FL-Next: sp=Translation initiation factor IF-2, chloroplastic; Phaseolus vulgaris (Kidney bean) (French bean). 0.0
• Sma3: Translation initiation factor IF-2 1.986e-34
Internal
sp_v3.0_unigene150878 SustainPine v3.0 453
• AutoFact: Eukaryotic initiation factor 2 beta subunit n=1 Tax=Ectocarpus siliculosus RepID=D7G233_ECTSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: eIF-2-beta 2.427e-13
C-terminus
sp_v3.0_unigene150944 SustainPine v3.0 438
• AutoFact: PREDICTED: similar to Eukaryotic initiation factor 4A-II n=1 Tax=Hydra magnipapillata RepID=UPI0001925CB9 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 4.553e-14
C-terminus
sp_v3.0_unigene151034 SustainPine v3.0 290
• AutoFact: Eukaryotic translation initiation factor 1A, Y-chromosomal n=1 Tax=Ascaris suum RepID=F1KZC0_ASCSU 6.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 1A 2.907e-19
Putative C-terminus
sp_v3.0_unigene151505 SustainPine v3.0 499
• AutoFact: Eukaryotic translation initiation factor 5A n=3 Tax=Picea RepID=Q3ZDK6_PICAB 4.0e-35
• FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 2.288e-20
Putative Complete
sp_v3.0_unigene151642 SustainPine v3.0 369
• AutoFact: Probable translation initiation factor SUI1 n=2 Tax=Ustilaginaceae RepID=E7A0P1_9BASI 3.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein translation factor SUI1 homolog 4.582e-15
Putative Complete
sp_v3.0_unigene152109 SustainPine v3.0 383
• AutoFact: Protein KIAA0664 homolog n=2 Tax=Xenopus (Silurana) tropicalis RepID=K0664_XENTR 7.0e-36
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene152234 SustainPine v3.0 362
• AutoFact: putative Glycine-rich protein 2 [Oryza sativa Japonica Group] dbj|BAD07599.1| putative Glycine-rich protein 2 [Oryza sativa Japonica Group] gb|EAZ21537.1| hypothetical protein OsJ_05164 [Oryza sativa Japonica Group] gb|ACD13288.1| cold shock domain protei 1.0e-17
• FL-Next: tr=Putative glycine-rich protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Cold-shock protein with RNA binding domain 4.714e-08
Putative N-terminus
sp_v3.0_unigene152549 SustainPine v3.0 284
• AutoFact: Eukaryotic translation initiation factor 5A n=1 Tax=Postia placenta Mad-698-R RepID=B8PCC0_POSPM 3.0e-39
• FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 6.006e-28
Putative N-terminus
sp_v3.0_unigene152596 SustainPine v3.0 475
• AutoFact: Translation initiation factor IF-3 n=2 Tax=Sphingobium RepID=D4YZ43_SPHJU 0.0
• FL-Next: sp=Translation initiation factor IF-3, chloroplastic; Porphyra yezoensis. Plastid; Chloroplast. 0.0
• Sma3: Translation initiation factor IF-3 5.518e-13
C-terminus
sp_v3.0_unigene152680 SustainPine v3.0 351
• AutoFact: Translation initiation factor eIF-2, gamma subunit n=1 Tax=Thalassiosira pseudonana RepID=B5YNZ5_THAPS 9.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene153063 SustainPine v3.0 534
• AutoFact: 40S ribosomal protein S3-1 [Arabidopsis thaliana] sp|Q9SIP7.1|RS31_ARATH RecName: Full=40S ribosomal protein S3-1 gb|AAK55690.1|AF378887_1 At2g31610/T9H9.13 [Arabidopsis thaliana] gb|AAD24852.1| 40S ribosomal protein; contains C-terminal domain [Arabidops 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3 1.377e-10
Internal
sp_v3.0_unigene153066 SustainPine v3.0 390
• AutoFact: Translation initiation factor IF-2 n=1 Tax=Flavobacterium johnsoniae UW101 RepID=IF2_FLAJ1 0.0
• FL-Next: sp=Translation initiation factor IF-2, chloroplastic; Rhodomonas salina (Cryptomonas salina). Plastid; Chloroplast. 0.0
• Sma3: Translation initiation factor IF-2 1.145e-20
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain