Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: translation initiation factor activity

Term: GO:0003743  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene142332 SustainPine v3.0 1111
• AutoFact: translation initiation factor 3 subunit B [Arabidopsis thaliana] gb|AED93710.1| translation initiation factor 3 subunit B [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: eIF3b 1.134e-08
Putative C-terminus
sp_v3.0_unigene142966 SustainPine v3.0 445
• AutoFact: Eukaryotic translation initiation factor 2 subunit 1 n=3 Tax=Arabidopsis RepID=Q9SIZ2_ARATH 9.00054e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 2 alpha subunit 5.743e-09
Internal
sp_v3.0_unigene143072 SustainPine v3.0 201
• AutoFact: Eukaryotic initiation factor 4A-3 n=2 Tax=Arabidopsis RepID=IF4A3_ARATH 4.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 3.817e-09
Internal
sp_v3.0_unigene143172 SustainPine v3.0 825
• AutoFact: Eukaryotic translation initiation factor 5A 2 n=3 Tax=Picea RepID=Q3ZDK4_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 6.397e-28
Putative Complete
sp_v3.0_unigene143185 SustainPine v3.0 787
• AutoFact: eukaryotic translation initiation factor 4E [Lactuca sativa] 3.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene143189 SustainPine v3.0 400
• AutoFact: TFIIF_alpha multi-domain protein 2.0e-33
• Sma3: Transcription Factor IIF, Rap30/Rap74, interaction 4.688e-09
coding
sp_v3.0_unigene143259 SustainPine v3.0 842
• AutoFact: Regulator of nonsense transcripts, putative n=1 Tax=Ricinus communis RepID=B9SD55_RICCO 0.0
• FL-Next: tr=Regulator of nonsense transcripts, putative; Ricinus communis (Castor bean). 0.0
N-terminus
sp_v3.0_unigene143512 SustainPine v3.0 492
• AutoFact: Protein translation factor SUI1 homolog n=22 Tax=Spermatophyta RepID=SUI1_ORYSJ 1.0e-22
• FL-Next: sp=Protein translation factor SUI1 homolog; Sporobolus stapfianus (Ressurection grass). 0.0
• Sma3: Protein translation factor SUI1 homolog 1.915e-15
C-terminus
sp_v3.0_unigene143589 SustainPine v3.0 261
• AutoFact: Eukaryotic translation initiation factor 5 n=4 Tax=Andropogoneae RepID=IF5_MAIZE 5.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 5 1.592e-08
Internal
sp_v3.0_unigene143608 SustainPine v3.0 396
• AutoFact: Gb|AAD26879.1 n=3 Tax=Arabidopsis RepID=Q9FG63_ARATH 3.00004e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene143647 SustainPine v3.0 897
• AutoFact: Protein translation factor SUI1 homolog n=1 Tax=Salix bakko RepID=SUI1_SALBA 8.99634e-43
• FL-Next: tr=Putative translation factor; Pinus pinaster (Maritime pine). 0.0
• Sma3: Protein translation factor SUI1 homolog 8.28e-15
Putative Complete
sp_v3.0_unigene144205 SustainPine v3.0 825
• AutoFact: Eukaryotic translation initiation factor 6-2 n=8 Tax=Magnoliophyta RepID=IF62_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 6 5.099e-24
N-terminus
sp_v3.0_unigene144211 SustainPine v3.0 662
• AutoFact: Chain B, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome gb|AAM92710.1| putative 40S ribosomal protein S3 [Triticum aestivum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3 1.218e-10
Complete
sp_v3.0_unigene144226 SustainPine v3.0 733
• AutoFact: Eukaryotic translation initiation factor 5A 2 n=3 Tax=Picea RepID=Q3ZDK4_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 6.199e-28
Complete
sp_v3.0_unigene144240 SustainPine v3.0 684
• AutoFact: putative translation factor [Pinus pinaster] gb|ABK20970.1| unknown [Picea sitchensis] gb|ABK22220.1| unknown [Picea sitchensis] gb|ABK23355.1| unknown [Picea sitchensis] gb|ABK26752.1| unknown [Picea sitchensis] gb|ABR16497.1| unknown [Picea sitchensis] 0.0
• FL-Next: tr=Putative translation factor; Pinus pinaster (Maritime pine). 0.0
• Sma3: Putative translation factor 0.0
Complete
sp_v3.0_unigene144498 SustainPine v3.0 1641
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein At2g44720 1.696e-09
Putative Complete
sp_v3.0_unigene144578 SustainPine v3.0 830
• AutoFact: Eukaryotic translation initiation factor 6-2 n=8 Tax=Magnoliophyta RepID=IF62_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 6 5.099e-24
N-terminus
sp_v3.0_unigene144717 SustainPine v3.0 286
• AutoFact: eukaryotic translation initiation factor 4E-1 [Zea mays] sp|O81481.1|IF4E1_MAIZE RecName: Full=Eukaryotic translation initiation factor 4E-1; Short=eIF-4E-1; Short=eIF4E-1; AltName: Full=eIF-4F 25 kDa subunit; AltName: Full=eIF-4F p26 subunit; AltName: Fu 6.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 4E-2 5.163e-18
Internal
sp_v3.0_unigene144723 SustainPine v3.0 525
• AutoFact: Eukaryotic translation initiation factor 5A 2 n=3 Tax=Picea RepID=Q3ZDK4_PICAB 3.0e-31
• FL-Next: tr=Eukaryotic translation initiation factor 5A 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Translation initiation factor 5A 3.478e-16
Complete
sp_v3.0_unigene144736 SustainPine v3.0 210
• AutoFact: Eukaryotic translation initiation factor 5A 2 n=3 Tax=Picea RepID=Q3ZDK4_PICAB 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 5A-1 1.178e-14
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain