Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: translation initiation factor activity

Term: GO:0003743  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene127932 SustainPine v3.0 1147
• AutoFact: Transcription initiation factor IIB n=7 Tax=Poaceae RepID=TF2B_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription initiation factor iib, putative 1.301e-11
C-terminus
sp_v3.0_unigene128078 SustainPine v3.0 557
• AutoFact: Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Picea sitchensis RepID=A9NNT0_PICSI 9.0e-17
• FL-Next: sp=Eukaryotic translation initiation factor 3 subunit G; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene128170 SustainPine v3.0 538
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene128399 SustainPine v3.0 530
• AutoFact: Eukaryotic translation initiation factor 2 beta subunit n=1 Tax=Elaeis guineensis RepID=B3TM12_ELAGV 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: eIF-2-beta 3.244e-13
C-terminus
sp_v3.0_unigene129323 SustainPine v3.0 590
• AutoFact: Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Picea sitchensis RepID=A9NNT0_PICSI 0.0
• FL-Next: sp=Eukaryotic translation initiation factor 3 subunit G; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene129441 SustainPine v3.0 393
• AutoFact: Protein translation factor SUI1 homolog n=1 Tax=Salix bakko RepID=SUI1_SALBA 4.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene130664 SustainPine v3.0 658
• AutoFact: translation initiation factor eIF-3 subunit 7 [Arabidopsis thaliana] dbj|BAB10117.1| eukaryotic translation initiation factor 3 subunit 7 [Arabidopsis thaliana] gb|AAP40378.1| putative eukaryotic translation initiation factor 3 subunit 7 [Arabidopsis thal 4.0e-18
• FL-Next: sp=Eukaryotic translation initiation factor 3 subunit D; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Eukaryotic translation initiation factor 3 subunit 7 7.068e-10
N-terminus
sp_v3.0_unigene133113 SustainPine v3.0 234
unknown
sp_v3.0_unigene133831 SustainPine v3.0 334
• AutoFact: Transcription initiation factor TFIIIB, Bdp1 subunit (ISS) [Ostreococcus tauri] emb|CAL50402.1| Transcription initiation factor TFIIIB, Bdp1 subunit (ISS) [Ostreococcus tauri] 5.0e-19
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene136205 SustainPine v3.0 357
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: eIF3a 5.925e-14
Internal
sp_v3.0_unigene137833 SustainPine v3.0 455
• AutoFact: translation initiation factor eIF-2B gamma subunit [Arabidopsis thaliana] gb|ABF59254.1| unknown protein [Arabidopsis thaliana] gb|AED92716.1| translation initiation factor eIF-2B gamma subunit [Arabidopsis thaliana] 4.0e-24
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene137855 SustainPine v3.0 419
• AutoFact: Transcription initiation factor IIA subunit 2 n=1 Tax=Picea sitchensis RepID=A9NRE0_PICSI 3.0e-31
• FL-Next: sp=Transcription initiation factor IIA subunit 2; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription initiation factor IIA subunit 2 6.498e-09
N-terminus
sp_v3.0_unigene139272 SustainPine v3.0 259
unknown
sp_v3.0_unigene140622 SustainPine v3.0 516
• AutoFact: putative transcription initiation factor [Oryza sativa Japonica Group] gb|ABB46979.1| mutant TFIIF-alpha, putative, expressed [Oryza sativa Japonica Group] 2.0e-20
• FL-Next: Isoform 2 of Transcription initiation factor IIF subunit alpha OS=Arabidopsis thaliana GN=RAP74 0.0
Putative C-terminus
sp_v3.0_unigene140863 SustainPine v3.0 264
• AutoFact: Translation initiation factor IF-2 (Fragment) n=2 Tax=Vitis vinifera RepID=D7U9V2_VITVI 3.0e-20
• FL-Next: sp=Translation initiation factor IF-2; Vitis vinifera (Grape). 0.0
• Sma3: Translation initiation factor IF-2 8.712e-08
C-terminus
sp_v3.0_unigene141392 SustainPine v3.0 390
• AutoFact: Translation initiation factor n=1 Tax=Elaeis guineensis RepID=B3TM17_ELAGV 7.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene141905 SustainPine v3.0 182
• AutoFact: RNA helicase [Arabidopsis thaliana] 5.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene142008 SustainPine v3.0 359
• AutoFact: Probable fibrillarin (Fragment) n=2 Tax=Picea RepID=O65058_PICMA 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fibrillarin, putative 6.336e-08
Putative N-terminus
sp_v3.0_unigene142174 SustainPine v3.0 230
• AutoFact: Eukaryotic initiation factor 4A (ATP-dependent RNA helicase eIF4A) n=1 Tax=Chlorella variabilis RepID=E1ZM95_9CHLO 1.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic initiation factor 4A-like protein 5.506e-08
Putative N-terminus
sp_v3.0_unigene142323 SustainPine v3.0 551
• AutoFact: DEAD box RNA helicase [Pisum sativum] gb|AAR97917.1| DEAD box RNA helicase [Pisum sativum] 1.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 6.27e-08
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain