Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: intracellular protein transport

Term: GO:0006886  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene79812 SustainPine v3.0 138
AutoFact: alpha-adaptin C homolog [Arabidopsis thaliana] 3.0e-08
FL-Next: sp=AP-2 complex subunit alpha-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene79917 SustainPine v3.0 134
AutoFact: AP-1 adaptor complex subunit mu, putative n=1 Tax=Penicillium marneffei ATCC 18224 RepID=B6QFT4_PENMQ 1.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Mu subunit of tetrameric clathrin adaptor complex AP1 9.747e-06
Internal
sp_v3.0_unigene80181 SustainPine v3.0 196
AutoFact: AP-2 complex subunit alpha, putative; K11824 AP-2 complex subunit alpha 8.0e-24
FL-Next: Isoform 3 of AP-2 complex subunit alpha-1 OS=Arabidopsis thaliana GN=ALPHA-ADR 0.0
Internal
sp_v3.0_unigene80236 SustainPine v3.0 114
AutoFact: Unassigned protein 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene80662 SustainPine v3.0 133
AutoFact: Clathrin adapter complex medium subunit-like protein (Fragment) n=3 Tax=Picea sitchensis RepID=E0ZBS8_PICSI 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative Clathrin Coat Assembly protein 1.066e-08
Internal
sp_v3.0_unigene80668 SustainPine v3.0 139
AutoFact: Coatomer protein complex n=1 Tax=Micromonas sp. RCC299 RepID=C1E4N8_MICSR 1.0e-15
FL-Next: sp=Coatomer subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Coatomer subunit alpha-2 2.364e-08
N-terminus
sp_v3.0_unigene80938 SustainPine v3.0 158
AutoFact: Microtubule organization protein n=2 Tax=Populus trichocarpa RepID=B9GIF2_POPTR 4.0e-10
FL-Next: sp=Protein MOR1; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene81321 SustainPine v3.0 133
AutoFact: Pyruvate kinase n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8N162_COPC7 2.0e-16
FL-Next: sp=Pyruvate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pyruvate kinase 0.0
Internal
sp_v3.0_unigene81541 SustainPine v3.0 156
AutoFact: beta-adaptin-like protein A [Arabidopsis thaliana] sp|Q9LDK9.1|APBLA_ARATH RecName: Full=Beta-adaptin-like protein A; Short=At-bA-Ad; Short=At-betaA-Ad; AltName: Full=AP complex subunit beta-A; AltName: Full=Adaptor protein complex AP subunit beta-A; AltN 2.0e-10
FL-Next: sp=Beta-adaptin-like protein A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene81672 SustainPine v3.0 505
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene94293 SustainPine v3.0 696
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene94963 SustainPine v3.0 287
AutoFact: clathrin adaptor complexes medium subunit family protein [Arabidopsis thaliana] gb|AAL58937.1|AF462850_1 At2g20790/F5H14.24 [Arabidopsis thaliana] gb|AAL90943.1| At2g20790/F5H14.24 [Arabidopsis thaliana] gb|AEC07073.1| clathrin adaptor complexes medium su 5.0e-38
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene96049 SustainPine v3.0 521
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SRS4_RICCO 0.0
FL-Next: tr=VP1/ABI3-like protein; Callitropsis nootkatensis. 0.0
Sma3: Transcription factor, putative 9.846e-07
Internal
sp_v3.0_unigene96655 SustainPine v3.0 425
AutoFact: Protein transport protein sec23, putative n=1 Tax=Ricinus communis RepID=B9SKJ9_RICCO 2.0e-20
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
N-terminus
sp_v3.0_unigene97383 SustainPine v3.0 780
AutoFact: Rab escort protein [Arabidopsis thaliana] gb|AAN03631.2|AF409086_1 Rab escort protein [Arabidopsis thaliana] gb|AEE74410.1| Rab escort protein [Arabidopsis thaliana] 3.99931e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene97507 SustainPine v3.0 321
AutoFact: sec23/sec24-like transport protein [Arabidopsis thaliana] gb|AAO29951.1| Unknown protein [Arabidopsis thaliana] gb|AAQ56793.1| At5g43670 [Arabidopsis thaliana] gb|AED94993.1| sec23/sec24-like transport protein [Arabidopsis thaliana] 2.0e-17
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene99318 SustainPine v3.0 589
AutoFact: Mitochondrial inner membrane translocase complex, subunit Tim44-related protein [Arabidopsis thaliana] dbj|BAC42743.1| unknown protein [Arabidopsis thaliana] gb|AED93679.1| Mitochondrial inner membrane translocase complex, subunit Tim44-related protein [A 2.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene100126 SustainPine v3.0 281
AutoFact: clathrin adaptor complexes medium subunit family protein [Arabidopsis thaliana] gb|AAL58937.1|AF462850_1 At2g20790/F5H14.24 [Arabidopsis thaliana] gb|AAL90943.1| At2g20790/F5H14.24 [Arabidopsis thaliana] gb|AEC07073.1| clathrin adaptor complexes medium su 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene100739 SustainPine v3.0 422
AutoFact: Beta-adaptin-like protein A n=3 Tax=Arabidopsis RepID=APBLA_ARATH 2.0e-24
FL-Next: sp=Beta-adaptin-like protein A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Misassembled
sp_v3.0_unigene102750 SustainPine v3.0 837
AutoFact: AP-3 complex subunit delta [Arabidopsis thaliana] ref|NP_849785.1| AP-3 complex subunit delta [Arabidopsis thaliana] ref|NP_001031156.1| AP-3 complex subunit delta [Arabidopsis thaliana] sp|Q9C744.1|AP3D_ARATH RecName: Full=AP-3 complex subunit delta; Alt 9.0e-23
FL-Next: sp=AP-3 complex subunit delta; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain