Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: binding

Term: GO:0005488  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2702 SustainPine v3.0 500
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
C-terminus
sp_v3.0_unigene2717 SustainPine v3.0 918
AutoFact: putative polygalacturonase PG1 [Oryza sativa Japonica Group] dbj|BAD30173.1| putative polygalacturonase PG1 [Oryza sativa Japonica Group] gb|EEE66781.1| hypothetical protein OsJ_23515 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polygalacturonase 0.0
Putative C-terminus
sp_v3.0_unigene2817 SustainPine v3.0 2892
AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9SG36_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: E3 ubiquitin ligase PUB14, putative 5.127e-12
Complete
sp_v3.0_unigene2848 SustainPine v3.0 531
AutoFact: 26S proteasome regulatory subunit N6 [Arabidopsis thaliana] gb|AAF88122.1|AC021043_15 Similar to 26S proteasome subunits [Arabidopsis thaliana] gb|AAK44018.1|AF370203_1 putative 19S proteosome subunit 9 [Arabidopsis thaliana] gb|AAL07160.1| putative 19S p 3.9937e-43
FL-Next: tr=Uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
N-terminus
sp_v3.0_unigene2918 SustainPine v3.0 550
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 2.156e-11
C-terminus
sp_v3.0_unigene2928 SustainPine v3.0 1086
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene2935 SustainPine v3.0 4364
AutoFact: exportin 1A [Arabidopsis thaliana] emb|CAB56597.1| Exportin1 (XPO1) protein [Arabidopsis thaliana] emb|CAB89280.1| Exportin1 (XPO1) protein [Arabidopsis thaliana] emb|CAC01715.1| Exportin1 (XPO1) protein [Arabidopsis thaliana] gb|AAL07205.1| putative expo 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene2947 SustainPine v3.0 1986
AutoFact: symplekin [Arabidopsis thaliana] dbj|BAF00598.1| hypothetical protein [Arabidopsis thaliana] gb|AEE30851.1| symplekin [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene2951 SustainPine v3.0 1299
AutoFact: tetratricopeptide repeat-containing protein [Arabidopsis thaliana] gb|AAL36394.1| unknown protein [Arabidopsis thaliana] gb|AAQ89668.1| At1g77230 [Arabidopsis thaliana] dbj|BAD43411.1| hypothetical protein [Arabidopsis thaliana] dbj|BAD43428.1| hypothetic 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene2960 SustainPine v3.0 1499
AutoFact: APO protein 3 [Arabidopsis thaliana] ref|NP_001119475.1| APO protein 3 [Arabidopsis thaliana] sp|Q9FH50.1|APO3_ARATH RecName: Full=APO protein 3, mitochondrial; Flags: Precursor dbj|BAB08879.1| unnamed protein product [Arabidopsis thaliana] gb|AED97538.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: APO protein 3, mitochondrial, putative 3.983e-09
Complete
sp_v3.0_unigene2981 SustainPine v3.0 738
AutoFact: cohesin loading factor subunit SCC2 [Arabidopsis thaliana] gb|ABQ12620.1| sister chromatid cohesion 2 [Arabidopsis thaliana] gb|AED92174.1| cohesin loading factor subunit SCC2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene3046 SustainPine v3.0 1136
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene3047 SustainPine v3.0 2056
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene3071 SustainPine v3.0 3002
AutoFact: microtubule bundling polypeptide TMBP200 [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Microtubule organization protein 1.463e-09
Complete
sp_v3.0_unigene3187 SustainPine v3.0 1477
AutoFact: 3-hydroxyisobutyrate dehydrogenase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 3-hydroxyisobutyrate dehydrogenase-like protein 5.523e-09
Complete
sp_v3.0_unigene3221 SustainPine v3.0 3935
AutoFact: vacuolar protein sorting 11 protein [Arabidopsis thaliana] gb|AAL32006.1|AF436824_1 At2g05170/F5G3.7 [Arabidopsis thaliana] gb|AAD29055.1| expressed protein [Arabidopsis thaliana] gb|AAO11614.1| At2g05170/F5G3.7 [Arabidopsis thaliana] gb|AEC05900.1| vacuo 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene3287 SustainPine v3.0 1025
AutoFact: Tetratricopeptide-like helical [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tetratricopeptide-like helical 6.356e-13
C-terminus
sp_v3.0_unigene3321 SustainPine v3.0 605
AutoFact: FAP multi-domain protein 5.0e-20
Sma3: Glycine-rich protein 5.632e-13
coding
sp_v3.0_unigene3394 SustainPine v3.0 1496
AutoFact: Mitochondrial substrate carrier family protein [Arabidopsis thaliana] gb|AAK92815.1| putative mitochondrial carrier protein [Arabidopsis thaliana] gb|AAL61924.1| putative mitochondrial carrier protein [Arabidopsis thaliana] gb|AAM14152.1| putative mitocho 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative mitochondrial carrier protein 8.509e-11
Putative Complete
sp_v3.0_unigene3424 SustainPine v3.0 2988
AutoFact: RecName: Full=Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a; Includes: RecName: Full=Enoyl-CoA hydratase/3-2-trans-enoyl-CoA isomerase/3-hydroxybutyryl-CoA epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA dehydrogenase emb|CAA556 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peroxisomal fatty acid beta-oxidation multifunctional protein 1.127e-11
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain