Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: binding

Term: GO:0005488  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2264 SustainPine v3.0 600
AutoFact: ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis thaliana] gb|ABK28304.1| unknown [Arabidopsis thaliana] gb|AEE81971.1| ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene2280 SustainPine v3.0 611
AutoFact: Contains similarity to gibberellin-stimulated transcript 1 like protein n=3 Tax=Arabidopsis RepID=Q8LFM2_ARATH 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GAST1 protein, putative 6.301e-09
Complete
sp_v3.0_unigene2293 SustainPine v3.0 4129
AutoFact: TPR repeat-containing thioredoxin TTL1 [Arabidopsis thaliana] sp|Q9MAH1.1|TTL1_ARATH RecName: Full=TPR repeat-containing thioredoxin TTL1; AltName: Full=Tetratricopeptide repeat thioredoxin-like 1 gb|AAF69536.1|AC008007_11 F12M16.20 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene2310 SustainPine v3.0 779
AutoFact: ubiquitin-protein ligase 1 [Arabidopsis thaliana] 0.0
FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: E3 ubiquitin protein ligase upl2, putative 5.237e-09
Internal
sp_v3.0_unigene2322 SustainPine v3.0 1952
AutoFact: peptidyl-prolyl isomerase [Arabidopsis thaliana] sp|Q9LDC0.1|FKB42_ARATH RecName: Full=42 kDa peptidyl-prolyl isomerase; AltName: Full=Peptidyl-prolyl cis-trans isomerase; Short=PPIase; AltName: Full=Protein TWISTED DWARF 1; AltName: Full=Protein ULTRACUR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene2344 SustainPine v3.0 1687
AutoFact: Phenylcoumaran benzylic ether reductase homolog TH6 n=4 Tax=Pinaceae RepID=Q9M523_TSUHE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene2351 SustainPine v3.0 5586
AutoFact: regulatory associated protein of mTOR [Arabidopsis thaliana] sp|Q93YQ1.1|RTOR1_ARATH RecName: Full=Regulatory-associated protein of TOR 1; AltName: Full=Protein RAPTOR 1; AltName: Full=Protein RAPTOR 1B; Short=AtRaptor1b gb|AAL24320.1| Unknown protein [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr8 scaffold_88, whole genome shotgun sequence 7.001e-10
Complete
sp_v3.0_unigene2362 SustainPine v3.0 560
AutoFact: GTP binding protein n=3 Tax=Andropogoneae RepID=B6SXN2_MAIZE 8.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene2390 SustainPine v3.0 1148
AutoFact: Unassigned protein
FL-Next: tr=Uncharacterized protein; Oryza glaberrima (African rice). 0.0
Putative C-terminus
sp_v3.0_unigene2398 SustainPine v3.0 1834
AutoFact: APO protein 2 [Arabidopsis thaliana] gb|AED96973.1| APO protein 2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: APO protein 3, mitochondrial, putative 3.983e-09
Complete
sp_v3.0_unigene2414 SustainPine v3.0 2831
AutoFact: peroxisomal 2,4-dienoyl-CoA reductase [Arabidopsis thaliana] sp|Q9LTV6.1|DECR2_ARATH RecName: Full=Peroxisomal 2,4-dienoyl-CoA reductase dbj|BAB02424.1| oxidoreductase, short-chain dehydrogenase/reductase family-like protein [Arabidopsis thaliana] gb|AAL6 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene2434 SustainPine v3.0 3158
AutoFact: Nuclear transport receptor exportin 4 (importin beta superfamily) (ISS) [Ostreococcus tauri] emb|CAL57664.1| Nuclear transport receptor exportin 4 (importin beta superfamily) (ISS) [Ostreococcus tauri] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene2500 SustainPine v3.0 2152
AutoFact: putative polyamine oxidase precursor [Oryza sativa Japonica Group] dbj|BAD25971.1| putative polyamine oxidase precursor [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Polyamine oxidase; Zea mays (Maize). 0.0
Sma3: Polyamine oxidase 6.195e-22
Complete
sp_v3.0_unigene2515 SustainPine v3.0 3827
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative C-terminus
sp_v3.0_unigene2518 SustainPine v3.0 2499
AutoFact: octicosapeptide/Phox/Be.1 domain-containing protein [Arabidopsis thaliana] gb|AAF70848.1|AC003113_15 F2401.12 [Arabidopsis thaliana] gb|AAL87265.1| unknown protein [Arabidopsis thaliana] gb|AAM45044.1| unknown protein [Arabidopsis thaliana] gb|AEE33961.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 70 (HSP70)-interacting protein, putative 4.303e-10
Putative Complete
sp_v3.0_unigene2592 SustainPine v3.0 3472
AutoFact: PREDICTED: similar to KAK (KAKTUS) isoform 1 n=2 Tax=Vitis vinifera RepID=UPI0001982DD6 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative HECT ubiquitin-protein ligase 3 1.023e-08
Complete
sp_v3.0_unigene2634 SustainPine v3.0 956
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene2658 SustainPine v3.0 2771
AutoFact: YTH domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Yth domain-containing protein, putative 6.029e-11
Complete
sp_v3.0_unigene2673 SustainPine v3.0 955
AutoFact: Progesterone 5beta reductase-A n=4 Tax=Solanaceae RepID=C0SUC5_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Progesterone 5-beta-reductase, putative 2.399e-08
C-terminus
sp_v3.0_unigene2683 SustainPine v3.0 2843
AutoFact: multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain