Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: binding

Term: GO:0005488  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene162962 SustainPine v3.0 321
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gb|AEE79864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene163008 SustainPine v3.0 365
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V1_PICAB 1.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
C-terminus
sp_v3.0_unigene163011 SustainPine v3.0 378
• AutoFact: Putative progesterone 5-beta-reductase n=1 Tax=Nierembergia aristata RepID=D9ILU8_9SOLA 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative progesterone 5-beta-reductase 2.578e-08
N-terminus
sp_v3.0_unigene163019 SustainPine v3.0 252
• AutoFact: Arm domain containing protein 1.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene163027 SustainPine v3.0 258
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative 2.586e-12
Internal
sp_v3.0_unigene163109 SustainPine v3.0 178
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Cycas revoluta RepID=B3U1U9_CYCRE 8.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 4.051e-25
Internal
sp_v3.0_unigene163140 SustainPine v3.0 314
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V0_PICAB 6.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
Internal
sp_v3.0_unigene163203 SustainPine v3.0 299
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Progesterone 5-beta-reductase, putative 1.767e-08
Internal
sp_v3.0_unigene163308 SustainPine v3.0 188
• AutoFact: putative peroxisomal membrane carrier protein [Arabidopsis thaliana] 2.0e-10
• FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
• Sma3: Peroxisomal membrane protein pmp34, putative 6.117e-08
Internal
sp_v3.0_unigene163344 SustainPine v3.0 249
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070 gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana] gb|AEC07259.1| pentatricopeptide repe 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 7.943e-21
C-terminus
sp_v3.0_unigene163422 SustainPine v3.0 197
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative, expressed 1.353e-06
Internal
sp_v3.0_unigene163445 SustainPine v3.0 186
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g53360, mitochondrial; Flags: Precursor emb|CAB67643.1| putative protein [Arabidopsis thaliana] gb|AEE7 4.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative, expressed 5.014e-09
N-terminus
sp_v3.0_unigene163463 SustainPine v3.0 456
• AutoFact: Transformation/transcription domain-associated protein n=1 Tax=Arabidopsis thaliana RepID=F4IPJ1_ARATH 0.0
• FL-Next: tr=Transformation/transcription domain-associated protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene163483 SustainPine v3.0 335
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SRF1_RICCO 3.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.159e-28
Internal
sp_v3.0_unigene163577 SustainPine v3.0 96
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S1X8_RICCO 4.0e-07
• FL-Next: sp=Pentatricopeptide repeat-containing protein At3g18110, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene163581 SustainPine v3.0 191
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene163620 SustainPine v3.0 310
• AutoFact: NUC130/3NT and SDA1 domain-containing protein [Arabidopsis thaliana] dbj|BAE98871.1| hypothetical protein [Arabidopsis thaliana] gb|AEE28977.1| NUC130/3NT and SDA1 domain-containing protein [Arabidopsis thaliana] 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene163656 SustainPine v3.0 334
• AutoFact: Probable fatty acyl-CoA reductase 4 n=3 Tax=Arabidopsis RepID=FACR4_ARATH 3.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Male sterility protein, putative 2.029e-15
Internal
sp_v3.0_unigene163676 SustainPine v3.0 405
• AutoFact: Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating n=1 Tax=Zea mays RepID=B6TKP9_MAIZE 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative 3-beta hydroxysteroid dehydrogenase/isomerase 7.7e-14
N-terminus
sp_v3.0_unigene163705 SustainPine v3.0 390
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tetratricopeptide-like helical 7.05e-12
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain