Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: binding

Term: GO:0005488  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene160659 SustainPine v3.0 295
• AutoFact: putative short-chain hydrogenase/reductase [Musa acuminata] 1.0e-10
• FL-Next: tr=(+)-neomenthol dehydrogenase; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
• Sma3: Putative uncharacterized protein T16L24.260 5.361e-06
C-terminus
sp_v3.0_unigene160742 SustainPine v3.0 428
• AutoFact: Short-chain dehydrogenase, putative n=1 Tax=Ricinus communis RepID=B9S0Q9_RICCO 3.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Forever young oxidoreductase 2.934e-08
Internal
sp_v3.0_unigene160830 SustainPine v3.0 338
• AutoFact: Unassigned protein
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
N-terminus
sp_v3.0_unigene160881 SustainPine v3.0 325
• AutoFact: Short-chain dehydrogenase/reductase family protein n=2 Tax=Arabidopsis RepID=D7LZK0_ARALL 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Short-chain dehydrogenase, putative 1.584e-18
Internal
sp_v3.0_unigene160950 SustainPine v3.0 459
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Cycas revoluta RepID=B3U1U9_CYCRE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
C-terminus
sp_v3.0_unigene160977 SustainPine v3.0 407
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Internal
sp_v3.0_unigene161014 SustainPine v3.0 354
• AutoFact: Dihydroflavonol 4-reductase n=2 Tax=Populus RepID=B9GRL5_POPTR 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dihydroflavonol 4-reductase 0.0
Putative C-terminus
sp_v3.0_unigene161123 SustainPine v3.0 481
• AutoFact: Leucoanthocyanidin reductase n=1 Tax=Pinus taeda RepID=Q3KN81_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Leucoanthocyanidin reductase 3.809e-29
C-terminus
sp_v3.0_unigene161174 SustainPine v3.0 359
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene161299 SustainPine v3.0 214
• AutoFact: E3 ubiquitin-protein ligase PUB22 [Arabidopsis thaliana] sp|Q9SVC6.1|PUB22_ARATH RecName: Full=E3 ubiquitin-protein ligase PUB22; AltName: Full=Plant U-box protein 22; AltName: Full=U-box domain-containing protein 22 emb|CAB43434.1| putative protein [Arab 4.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr8 scaffold_99, whole genome shotgun sequence 1.105e-08
N-terminus
sp_v3.0_unigene161361 SustainPine v3.0 418
• AutoFact: oxidoreductase [Aspergillus clavatus NRRL 1] gb|EAW12991.1| oxidoreductase [Aspergillus clavatus NRRL 1] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene161368 SustainPine v3.0 461
• AutoFact: Cinnamoyl CoA reductase (Fragment) n=3 Tax=Pseudotsuga RepID=C6F7Z4_PSEMZ 3.0e-36
• FL-Next: tr=Cinnamoyl-CoA reductase; Pinus massoniana. 0.0
• Sma3: Cinnamoyl-CoA reductase 0.0
C-terminus
sp_v3.0_unigene161535 SustainPine v3.0 372
• AutoFact: Pentatricopeptide repeat protein 91 n=3 Tax=Funariaceae RepID=F5CAE1_FUNHY 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 8.853e-14
C-terminus
sp_v3.0_unigene161545 SustainPine v3.0 287
• AutoFact: condensin-2 complex subunit D3 [Arabidopsis thaliana] emb|CAB45995.1| hypothetical protein [Arabidopsis thaliana] emb|CAB78631.1| hypothetical protein [Arabidopsis thaliana] gb|AEE83663.1| condensin-2 complex subunit D3 [Arabidopsis thaliana] 3.0e-21
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene161568 SustainPine v3.0 390
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2IVI0_NOSP7 5.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl isomerase FKBP12 1.541e-12
Internal
sp_v3.0_unigene161584 SustainPine v3.0 418
• AutoFact: L-lactate dehydrogenase n=1 Tax=Picea sitchensis RepID=D5AAB2_PICSI 0.0
• FL-Next: sp=L-lactate dehydrogenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: L-lactate dehydrogenase 0.0
C-terminus
sp_v3.0_unigene161605 SustainPine v3.0 330
• AutoFact: Cinnamyl alcohol dehydrogenase n=4 Tax=Rosaceae RepID=Q2Z1Z0_PRUMU 7.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cinnamyl alcohol dehydrogenase 3.812e-12
C-terminus
sp_v3.0_unigene161670 SustainPine v3.0 248
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Cycas revoluta RepID=B3U1U8_CYCRE 5.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
C-terminus
sp_v3.0_unigene161676 SustainPine v3.0 421
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070 gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana] gb|AEC07259.1| pentatricopeptide repe 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
C-terminus
sp_v3.0_unigene161761 SustainPine v3.0 385
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g57430, chloroplastic; Flags: Precursor gb|AEE79654.1| pentatricopeptide repeat-containing protein [Ara 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 3.723e-24
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain