Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: binding

Term: GO:0005488  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene9833 SustainPine v3.0 2266
AutoFact: putative short-chain type alcohol dehydrogenase [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene9903 SustainPine v3.0 2759
AutoFact: male sterility 2 [Brassica rapa subsp. chinensis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fatty acyl CoA reductase 2.596e-12
Complete
sp_v3.0_unigene9955 SustainPine v3.0 1550
AutoFact: tropine dehydrogenase [Arabidopsis thaliana] dbj|BAA98195.1| short chain alcohol dehydrogenase-like [Arabidopsis thaliana] gb|AAO22710.1| putative short chain alcohol dehydrogenase [Arabidopsis thaliana] gb|AAO42448.1| putative short chain alcohol dehydro 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative tropinone reductase 0.0
Complete
sp_v3.0_unigene9971 SustainPine v3.0 1575
AutoFact: leaf and flower related protein [Arabidopsis thaliana] dbj|BAB02090.1| unnamed protein product [Arabidopsis thaliana] gb|AAL60013.1| unknown protein [Arabidopsis thaliana] gb|AAM20062.1| unknown protein [Arabidopsis thaliana] gb|AEE76703.1| leaf and flowe 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene9996 SustainPine v3.0 2280
AutoFact: Importin subunit alpha-1 [Arabidopsis thaliana] ref|NP_850524.1| Importin subunit alpha-1 [Arabidopsis thaliana] sp|Q96321.2|IMA1_ARATH RecName: Full=Importin subunit alpha-1; AltName: Full=Karyopherin subunit alpha-1; Short=KAP-alpha-1 gb|AAC27644.1| imp 0.0
FL-Next: sp=Importin subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Importin alpha, putative 5.68e-22
Complete
sp_v3.0_unigene10010 SustainPine v3.0 2306
AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9RNX0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene10024 SustainPine v3.0 1280
AutoFact: polygalacturonase [Arabidopsis thaliana] sp|Q949Z1.1|PGLR4_ARATH RecName: Full=Polygalacturonase At1g48100; Short=PG; AltName: Full=Pectinase At1g48100; Flags: Precursor gb|AAK92733.1| putative polygalacturonase PG1 [Arabidopsis thaliana] gb|AAM20001.1| p 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polygalacturonase 0.0
Putative C-terminus
sp_v3.0_unigene10133 SustainPine v3.0 1998
AutoFact: COP9 signalosome complex subunit 1 [Arabidopsis thaliana] sp|P45432.2|CSN1_ARATH RecName: Full=COP9 signalosome complex subunit 1; Short=CSN complex subunit 1; AltName: Full=Constitutive photomorphogenesis protein 11; AltName: Full=Protein FUSCA 6 gb|AAK2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: COP9 signalosome complex subunit 1 4.617e-09
Complete
sp_v3.0_unigene10194 SustainPine v3.0 1214
AutoFact: PREDICTED: similar to Follicular lymphoma variant translocation 1 [Strongylocentrotus purpuratus] ref|XP_001180217.1| PREDICTED: similar to Follicular lymphoma variant translocation 1 [Strongylocentrotus purpuratus] 4.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene10285 SustainPine v3.0 2112
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S1R1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene10352 SustainPine v3.0 1464
AutoFact: pfam11916, Vac14_Fig4_bd, Vacuolar protein 14 C-terminal Fig4p binding 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene10406 SustainPine v3.0 446
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene10416 SustainPine v3.0 3844
AutoFact: Putativepod-specific dehydrogenase SAC25 n=5 Tax=Arabidopsis RepID=Q8LCE7_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Short-chain dehydrogenase, putative 3.848e-18
Misassembled
sp_v3.0_unigene10418 SustainPine v3.0 1988
AutoFact: Forever young oxidoreductase n=2 Tax=Solanum RepID=Q8W2K0_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Forever young oxidoreductase 2.893e-08
Complete
sp_v3.0_unigene10432 SustainPine v3.0 1537
AutoFact: DnaJ domain-containing protein n=3 Tax=Arabidopsis RepID=Q8GUN6_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr10 scaffold_179, whole genome shotgun sequence 6.084e-06
Putative C-terminus
sp_v3.0_unigene10448 SustainPine v3.0 1801
AutoFact: Malate dehydrogenase [NADP], chloroplastic n=2 Tax=Flaveria RepID=MDHP_FLABI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene10449 SustainPine v3.0 632
AutoFact: high chlorophyll fluorescence phenotype 173 protein [Arabidopsis thaliana] gb|AAL32710.1| Unknown protein [Arabidopsis thaliana] gb|AAM91123.1| unknown protein [Arabidopsis thaliana] gb|AEE29489.1| high chlorophyll fluorescence phenotype 173 protein [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative UOS1 2.209e-08
Internal
sp_v3.0_unigene10475 SustainPine v3.0 2106
AutoFact: male sterility 2 [Brassica rapa subsp. chinensis] 0.0
FL-Next: sp=Fatty acyl-CoA reductase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Acyl CoA reductase-protein 1.612e-08
Complete
sp_v3.0_unigene10481 SustainPine v3.0 3864
AutoFact: IBN_N domain containing protein 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Putative transportin 8.893e-09
Complete
sp_v3.0_unigene10517 SustainPine v3.0 980
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain