Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: binding

Term: GO:0005488  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene9345 SustainPine v3.0 1490
• AutoFact: zinc finger (MYND type) family protein / F-box family protein [Arabidopsis thaliana] sp|Q9FYF9.1|FB76_ARATH RecName: Full=F-box protein At1g67340 gb|AAG00241.1|AC002130_6 F1N21.16 [Arabidopsis thaliana] gb|AAL14418.1| At1g67340/F1N21_16 [Arabidopsis thali 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MYND finger family protein 5.7e-08
Complete
sp_v3.0_unigene9352 SustainPine v3.0 1383
• AutoFact: [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene9414 SustainPine v3.0 645
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 3,8-divinyl protochlorophyllide a 8-vinyl reductase 1.089e-13
C-terminus
sp_v3.0_unigene9430 SustainPine v3.0 400
• AutoFact: HEAT repeat-containing protein [Arabidopsis thaliana] gb|AAL47427.1| AT5g16210/T21H19_130 [Arabidopsis thaliana] gb|AED92261.1| HEAT repeat-containing protein [Arabidopsis thaliana] 4.0e-38
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene9437 SustainPine v3.0 217
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q93WC5.1|PP300_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g01990, mitochondrial; Flags: Precursor gb|AAK62637.1| AT4g01990/T7B11_26 [Arabidopsis thaliana] gb|AAL 3.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene9447 SustainPine v3.0 1488
• AutoFact: 3-beta hydroxysteroid dehydrogenase/isomerase n=4 Tax=Andropogoneae RepID=B6TQB4_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene9460 SustainPine v3.0 1238
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330 dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76753.1| pentatric 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.818e-06
N-terminus
sp_v3.0_unigene9497 SustainPine v3.0 2458
• AutoFact: ARM-repeat/tetratricopeptide repeat-like protein [Arabidopsis thaliana] dbj|BAF01564.1| hypothetical protein [Arabidopsis thaliana] gb|AED91507.1| ARM-repeat/tetratricopeptide repeat-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Sma3: Heat shock protein 70 (HSP70)-interacting protein, putative 5.731e-11
Complete
sp_v3.0_unigene9532 SustainPine v3.0 1392
• AutoFact: Protein plastid transcriptionally active 16 n=3 Tax=Arabidopsis RepID=Q9STF2_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene9604 SustainPine v3.0 920
• AutoFact: myc-regulated DEAD/H box 18 RNA helicase-like (ISS) [Ostreococcus tauri] emb|CAL55333.1| myc-regulated DEAD/H box 18 RNA helicase-like (ISS) [Ostreococcus tauri] 6.0e-16
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene9606 SustainPine v3.0 428
• AutoFact: origin recognition complex subunit 4 [Zea mays] gb|AAL10455.1|AF417484_1 origin recognition complex subunit 4 [Zea mays] 6.0e-26
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative N-terminus
sp_v3.0_unigene9666 SustainPine v3.0 665
• AutoFact: Thioredoxin H-type n=5 Tax=Picea RepID=TRXH_PICMA 1.4013e-45
• FL-Next: sp=Thioredoxin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Thioredoxin h 1.291e-39
Complete
sp_v3.0_unigene9685 SustainPine v3.0 1256
• AutoFact: Mitochondrial substrate carrier family protein [Arabidopsis thaliana] dbj|BAA97309.1| mitochondrial carrier protein-like [Arabidopsis thaliana] gb|AAP40437.1| putative mitochondrial carrier protein [Arabidopsis thaliana] gb|AAU90078.1| At5g64970 [Arabidop 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein brittle-1, chloroplast, putative 3.861e-09
Complete
sp_v3.0_unigene9716 SustainPine v3.0 586
• AutoFact: Unassigned protein
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
N-terminus
sp_v3.0_unigene9731 SustainPine v3.0 612
• AutoFact: pfam12807, eIF3_p135, Translation initiation factor eIF3 subunit 135 6.0e-34
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Eukaryotic translation initiation factor 3 subunit, putative 1.816e-10
Internal
sp_v3.0_unigene9739 SustainPine v3.0 1079
• AutoFact: Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gb|AAL61926.1| putative protein [Arabidopsis thaliana] gb|AAP37723.1| At4g18810 [Arabidopsis thaliana] gb|AEE84092.1| Rossmann-fold NAD(P)-binding domain-containing protein [Ara 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene9740 SustainPine v3.0 2062
• AutoFact: Probable ubiquitin activating enzyme 2 (Fragment) n=3 Tax=Picea RepID=O65078_PICMA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Probable ubiquitin activating enzyme 2 0.0
Complete
sp_v3.0_unigene9784 SustainPine v3.0 1074
• AutoFact: Peptidyl-prolyl isomerase n=1 Tax=Zea mays RepID=B6TI78_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase, FKBP-type 1.259e-17
N-terminus
sp_v3.0_unigene9794 SustainPine v3.0 2433
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr14 scaffold_54, whole genome shotgun sequence 9.333e-07
Complete
sp_v3.0_unigene9807 SustainPine v3.0 1861
• AutoFact: PREDICTED: similar to protein transporter n=1 Tax=Vitis vinifera RepID=UPI000198299D 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain