Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: small ribosomal subunit

Term: GO:0015935  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene192577 SustainPine v3.0 440
• AutoFact: 40S ribosomal protein S5 (Fragment) n=5 Tax=Spermatophyta RepID=RS5_CICAR 1.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 4.317e-18
C-terminus
sp_v3.0_unigene192615 SustainPine v3.0 533
• AutoFact: ribosomal protein SA [Antheraea yamamai] 4.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene192790 SustainPine v3.0 376
• AutoFact: 40S ribosomal protein SA n=2 Tax=Vitis vinifera RepID=RSSA_VITVI 3.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein SA 1.096e-36
N-terminus
sp_v3.0_unigene193108 SustainPine v3.0 535
• AutoFact: Putative ribosomal protein S2 n=1 Tax=Barentsia elongata RepID=A8UAC3_9BILA 0.0
• FL-Next: tr=40S ribosomal protein S2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 40S ribosomal protein S2 2.48e-19
C-terminus
sp_v3.0_unigene193283 SustainPine v3.0 408
• AutoFact: 40S ribosomal protein S2 n=14 Tax=Drosophila RepID=RS2_DROME 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S2 1.932e-19
Internal
sp_v3.0_unigene193296 SustainPine v3.0 245
• AutoFact: S2 n=1 Tax=Suberites domuncula RepID=Q4KTE1_SUBDO 7.0e-18
• FL-Next: tr=40S ribosomal protein S2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Putative 40S ribosomal protein S2 1.013e-08
C-terminus
sp_v3.0_unigene193367 SustainPine v3.0 686
• AutoFact: 30S ribosomal protein S2 n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=E3B5M0_9SPHI 0.0
• FL-Next: sp=30S ribosomal protein S2, chloroplastic; Pinus nelsonii. Plastid; Chloroplast. 0.0
• Sma3: 30S ribosomal protein S2, chloroplastic 0.0
Putative Complete
sp_v3.0_unigene193472 SustainPine v3.0 586
• AutoFact: 40S ribosomal protein S3 [Danio rerio] gb|AAH45902.1| Ribosomal protein S3 [Danio rerio] gb|AAI65099.1| Rps3 protein [Danio rerio] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3 1.072e-10
C-terminus
sp_v3.0_unigene193566 SustainPine v3.0 557
• AutoFact: 60S ribosomal protein L8 [Xenopus (Silurana) tropicalis] sp|Q6PBF0.3|RL8_XENTR RecName: Full=60S ribosomal protein L8 gb|AAH59744.1| ribosomal protein L8 [Xenopus (Silurana) tropicalis] emb|CAJ83193.1| ribosomal protein L8 [Xenopus (Silurana) tropicalis] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L8 6.427e-09
C-terminus
sp_v3.0_unigene193622 SustainPine v3.0 279
• AutoFact: PREDICTED: similar to Ribosomal protein S9 isoform 2 n=1 Tax=Pan troglodytes RepID=UPI000058BD08 2.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 8.40779e-45
C-terminus
sp_v3.0_unigene196171 SustainPine v3.0 320
• AutoFact: Ribosomal protein S15 (Fragment) n=2 Tax=Mollusca RepID=Q8ITA6_AEQIR 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S15 1.686e-16
N-terminus
sp_v3.0_unigene197711 SustainPine v3.0 398
• AutoFact: ribosomal protein S7 [Ornithodoros parkeri] 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 4.317e-18
C-terminus
sp_v3.0_unigene198348 SustainPine v3.0 429
• AutoFact: 30S ribosomal protein S12 n=2 Tax=Pyrenophora RepID=B2WGH1_PYRTR 0.0
• FL-Next: sp=30S ribosomal protein S12, chloroplastic; Keteleeria davidiana (David's keteleeria) (Pseudotsuga davidiana). Plastid; Chloroplast. 0.0
• Sma3: 30S ribosomal protein S12, chloroplastic 0.0
N-terminus
sp_v3.0_unigene198638 SustainPine v3.0 156
• AutoFact: 40S ribosomal protein S5 n=2 Tax=Pucciniales RepID=E3K755_PUCGT 4.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 3.497e-21
Internal
sp_v3.0_unigene199711 SustainPine v3.0 320
• AutoFact: Putative 40S ribosomal protein RPS23 n=1 Tax=Phoronis muelleri RepID=B2YI18_9BILA 4.2039e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S23 1.718e-10
N-terminus
sp_v3.0_unigene199822 SustainPine v3.0 358
• AutoFact: 40S ribosomal protein S3, putative n=3 Tax=Perkinsus marinus ATCC 50983 RepID=C5L603_9ALVE 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3 9.473e-11
N-terminus
sp_v3.0_unigene199855 SustainPine v3.0 361
• AutoFact: 40S ribosomal protein S3, putative n=3 Tax=rosids RepID=B9RK17_RICCO 3.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3 1.183e-10
C-terminus
sp_v3.0_unigene199967 SustainPine v3.0 527
• AutoFact: Putative 60S ribosomal protein RPL8 (Fragment) n=1 Tax=Phoronis muelleri RepID=B2YI29_9BILA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L8 2.922e-08
N-terminus
sp_v3.0_unigene200146 SustainPine v3.0 425
• AutoFact: 40S ribosomal protein SA n=1 Tax=Nematostella vectensis RepID=RSSA_NEMVE 1.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein SA 1.096e-36
N-terminus
sp_v3.0_unigene200167 SustainPine v3.0 298
• AutoFact: Ribosomal protein L8 n=2 Tax=Chlamydomonadales RepID=A8IVK1_CHLRE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L8 6.663e-09
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain