Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: small ribosomal subunit

Term: GO:0015935  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene183497 SustainPine v3.0 582
• AutoFact: 40S ribosomal protein S10 n=2 Tax=Pucciniales RepID=E3JQX9_PUCGT 9.94922e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S20 1.103e-14
Complete
sp_v3.0_unigene183779 SustainPine v3.0 453
• AutoFact: 40S ribosomal protein S15 n=16 Tax=Poaceae RepID=RS15_ORYSJ 8.40779e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S15 0.0
Putative Complete
sp_v3.0_unigene185966 SustainPine v3.0 294
• AutoFact: 40S ribosomal protein S3-3 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NDL2_PHYIT 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3, putative 1.103e-08
C-terminus
sp_v3.0_unigene186018 SustainPine v3.0 546
• AutoFact: ribosomal protein S20 [Chlamys farreri] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S20 1.317e-14
Putative Complete
sp_v3.0_unigene186069 SustainPine v3.0 556
• AutoFact: PREDICTED: similar to yeast ribosomal protein S28 homologue n=1 Tax=Monodelphis domestica RepID=UPI0000F2C5F5 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S23 8.439e-09
Complete
sp_v3.0_unigene186165 SustainPine v3.0 615
• AutoFact: ribosomal protein S5 [synthetic construct] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 2.11e-21
Putative Complete
sp_v3.0_unigene186445 SustainPine v3.0 475
• AutoFact: 40S ribosomal protein S12 n=3 Tax=Tetrahymena thermophila RepID=RS12_TETTH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S23 1.975e-10
Putative Complete
sp_v3.0_unigene186447 SustainPine v3.0 572
• AutoFact: 40S ribosomal protein S5 [Chlamydomonas sp. ICE-L] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 6.725e-18
Putative Complete
sp_v3.0_unigene186636 SustainPine v3.0 443
• AutoFact: 40S ribosomal protein S3-2 [Arabidopsis thaliana] sp|Q9M339.1|RS32_ARATH RecName: Full=40S ribosomal protein S3-2 gb|AAL16173.1|AF428405_1 AT3g53870/F5K20_170 [Arabidopsis thaliana] emb|CAB88349.1| ribosomal protein S3a homolog [Arabidopsis thaliana] gb|A 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3 8.059e-11
C-terminus
sp_v3.0_unigene187502 SustainPine v3.0 409
• AutoFact: 40S ribosomal protein S20 n=4 Tax=Pleosporineae RepID=B2W8W1_PYRTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S20 1.317e-14
C-terminus
sp_v3.0_unigene188395 SustainPine v3.0 629
• AutoFact: Ribosomal protein S23 n=3 Tax=Chlorophyta RepID=A8IJQ4_CHLRE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S23 0.0
Putative Complete
sp_v3.0_unigene188404 SustainPine v3.0 486
• AutoFact: 40S ribosomal protein S15 n=1 Tax=Camponotus floridanus RepID=E2APF5_9HYME 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S15 9.608e-17
Complete
sp_v3.0_unigene188440 SustainPine v3.0 662
• AutoFact: Putative 40S ribosomal protein RPS5 n=1 Tax=Phoronis muelleri RepID=B2YI07_9BILA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 2.11e-21
Putative Complete
sp_v3.0_unigene188714 SustainPine v3.0 542
• AutoFact: Ribosomal protein S20 n=2 Tax=Chlamydomonadales RepID=A8J8M9_CHLRE 7.00649e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S20 0.0
Complete
sp_v3.0_unigene188724 SustainPine v3.0 530
• AutoFact: Putative 40S ribosomal protein S9 n=1 Tax=Crithidia sp. ATCC 30255 RepID=C6K3P0_9TRYP 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 2.52234e-44
C-terminus
sp_v3.0_unigene188835 SustainPine v3.0 562
• AutoFact: 40S ribosomal protein S9-1 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NCA2_PHYIT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 2.38221e-44
C-terminus
sp_v3.0_unigene188838 SustainPine v3.0 450
• AutoFact: 60S ribosomal subunit protein L8, putative n=4 Tax=Plasmodium RepID=B3L699_PLAKH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L8 6.663e-09
C-terminus
sp_v3.0_unigene188840 SustainPine v3.0 387
• AutoFact: Ribosomal protein S3 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9BX16_9EUKA 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3 8.239e-11
Putative C-terminus
sp_v3.0_unigene188917 SustainPine v3.0 544
• AutoFact: ribosomal protein S5a [Drosophila melanogaster] ref|XP_001977532.1| GG18202 [Drosophila erecta] ref|XP_002042347.1| GM13336 [Drosophila sechellia] ref|XP_002101460.1| GE15619 [Drosophila yakuba] sp|Q24186.1|RS5A_DROME RecName: Full=40S ribosomal protein S 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 1.135e-21
Putative C-terminus
sp_v3.0_unigene188920 SustainPine v3.0 479
• AutoFact: ribosomal protein L [Argopecten irradians] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L8 6.743e-09
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain